Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01117 ATGGCTGAAGAAAATGTGGGATATGAAAATTCTTCCAGAATTGAACCCAAGCGTAGTCATCAGTGGTTTATGGATACAGGTGAACCTGAAATGTTCAGCAACAAGAAACAAGCAGTTGAAGATGTTAGTGGTAGGCCAATTTCAGGAGTTTCACATGTGAATGTACCCCAATGGGACACCAATTCTGGATTTCACTCTGTCACGGGTCAATTTTCTGATCGTCTTTTTGGATCTGATCTTGCTAGGAGTGTGAATTTGGTTGATAAGAATGTGCCATCTATTGTGAGTGGAAATATGAACATGGGAAGGAAGGATTTTGAGCATCAATATGGTAATGATCCTTCTGTGGGGTTGTCAATATCTCATTCCATTGCAGACCCATCATCATGTCTCAATTTTGGTGGCATCAGAAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACAATTGCATGCCTTCTGCATCCATGGGGCACTCCTATAGCAGGGAAGATAACAGTGCAATTTCAGTAGGTGCTGGCTACAGTAAGAATGATGGCAATATTTCGCTGGGTCCTACTTATAATAATAGAAATGACAACACCATTGGTATGGGGACTAGAATAAGTAGTAAGACTGATGACAATCTTCTTTCAGTGGCTCACAACTTCAATAAAGGGGATGGGAGTTTTATGTTGATGGGCCACAATTATGGCAAGGGAGATGAAAGTATCTTATCAATGGGTCAGCCCTTTGACAAGGGAGATGGGAATTTCATATCAATGGGTCAATCATATGAGAAAGAAGATGGGAATTTAATATCTCTGGGCACCTCATATTCCAAGGGGCACGAGAGCTTTATATCAATTGGTCCAACCTATGGTAAATCAGGAGAGAATTTCATTACTGTTGCTCCTTATGACAAGGGTACCGATCATTTAATATCAATGGGTCCAACATATGATAAGTTGGATTCAAATATTACGTCAACAGTTCCATCATATGACAGAGGCGATTCTAGTTCTTTACCTGTGGGTCAAAATTCCCGTAAGGGTCAGAGCAGTACCATATCTTTTGGAGGTTTTCACGATGACCCTGAAGCAAATCCCTCTGGTGGAATTATTAGTGGCTATGATCTGTTGATTGGAAACCAGAGCTCAGCTCAAGGTTTGGATAGTCAGAATGATCTGACTGAAACGAACACTGAATCACTTGTAAATAGCATTCCGAAACTCAATACTAAAAATGATACTGTTGTTAAAAACAAAGAGCCTAAGTCAACAACCAAGAAGGCTCCTACGAATAACTTCCCTTCAAATGTCAAAAGTTTACTGTCAACCGGTATTTTTGATGGTGTTCAGGTGAAATATGTTTCATGGTCACGGGAGTTTCAAGAATATGCTTGGCAGAAGAGTCTTAAAGGAATCATAAAAGGAACTGGGTATTTGTGTTCATGTGACGACTGCAAGCAGTCAAAGGTGGGCATTTCAAATCACTTACATTCTGATAATCTGCATAACCGAAATGATTGTGCTCACATATTAAATTTTATCATGAAGGCTCTTAATGCATATGAGTTTGAGCGTCATGCTGGTGCCAAGACAAAACACCCCAATAATCACATATACTTTGAGAATGGAAAAACCATTTATGCTGTTGTTCAAGAGCTGAAAAACACTCCTCAGGAGATGCTTTTTGATGCAATTCAAAATGTGACTGGCTCTACCATCAACCAAAAGAACTTTCGAATATGGAAAGCATCATACCAAGCTGCTACTCGGGAGCTTCAACGTATTTATGGAAAGGATGAAGTGGTAATTCCGTCTTGA 1806 0.3965 MAEENVGYENSSRIEPKRSHQWFMDTGEPEMFSNKKQAVEDVSGRPISGVSHVNVPQWDTNSGFHSVTGQFSDRLFGSDLARSVNLVDKNVPSIVSGNMNMGRKDFEHQYGNDPSVGLSISHSIADPSSCLNFGGIRKVKVNQVRDSDNCMPSASMGHSYSREDNSAISVGAGYSKNDGNISLGPTYNNRNDNTIGMGTRISSKTDDNLLSVAHNFNKGDGSFMLMGHNYGKGDESILSMGQPFDKGDGNFISMGQSYEKEDGNLISLGTSYSKGHESFISIGPTYGKSGENFITVAPYDKGTDHLISMGPTYDKLDSNITSTVPSYDRGDSSSLPVGQNSRKGQSSTISFGGFHDDPEANPSGGIISGYDLLIGNQSSAQGLDSQNDLTETNTESLVNSIPKLNTKNDTVVKNKEPKSTTKKAPTNNFPSNVKSLLSTGIFDGVQVKYVSWSREFQEYAWQKSLKGIIKGTGYLCSCDDCKQSKVGISNHLHSDNLHNRNDCAHILNFIMKALNAYEFERHAGAKTKHPNNHIYFENGKTIYAVVQELKNTPQEMLFDAIQNVTGSTINQKNFRIWKASYQAATRELQRIYGKDEVVIPS* 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01117 601 Pfam Tify domain binding domain 467 549 IPR032308 -
Lapu1g01117 601 MobiDBLite consensus disorder prediction 321 352 - -
Lapu1g01117 601 MobiDBLite consensus disorder prediction 321 360 - -
Lapu1g01117 601 SUPERFAMILY Porins 159 334 - -
Lapu1g01117 601 PANTHER AUTOIMMUNE REGULATOR 3 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01117 Lapu-Chr1 24231980 24238032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01117 422 582 PHD Transcription Factor Family AT3G53680 44.720 4.24e-34 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01117 - - gmx:100782217 1032.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01117 1 24231980 24238032 Lapu1g01117 1 24231980 24238032 ECH
Lapu7g00823 7 9777284 9787642 Lapu1g01117 1 24231980 24238032 ECH