Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01112 ATGGTGAACGTAATGGAGTGGCAGAAGCAGCGTTGGCAACCAAACGGGAACGCGGAAATGATGTACGTCAAAGTCATGACCGATGAACAACTCGAGACTCTCCGCAAACAGATTGCGGTTTACGCAACAATCTGCGAACAACTCGTCGAGATGCACAAAACCATCTCTTCTCACCAAGATCTCGCAGGGATTAGACTGGGAAATATGTACTGCGATCCTTTATTGGGGTCTGGAGGGCACAAAATAGCTTCGAGGCAGAGGTGGACTCCGACGGCTATGCAGCTTCAGATTCTGGAGCGGATATTTGATCAGGGGACTGGGACTCCCAGCAAGGAAAGGATCAAGGAGATCACTGCTGAGCTCAGCCAGCATGGCCAGATTTCTGAGACTAATGTGTATAACTGGTTTCAGAATAGGCGGGCTCGCTCCAAAAGAAAGCAGCAGAATGTGGCACCTGGTGTTAATGCGGAATCGGAAGTAGAGACCGAGGTTGATTCCAAGGATAAGAAGACAAAGTCGGACGATTTTTGGTCTCAGCTCAGTGTTTCTGCTGGACCTTCTGATAATTTAGGCTTCCAGAACCATGAGGATCTGCAATACTTGAATGAGAATCCAGAGTCCAACAAACCAGATTCTGTTTTCCCGTCTGATGGAAGTATAAGACCTACTAGAAATTTCAACCATGTGCCTGTTTTTGATGGGCTACTATCGAACCCCGGGAGCGACTATCTTACTGGAAAAATGGAAGCACCTGAGAACTACAACTTATACCAGCCATCGGACGACTTCGACATGGCAGGCTGA 804 0.4789 MVNVMEWQKQRWQPNGNAEMMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTISSHQDLAGIRLGNMYCDPLLGSGGHKIASRQRWTPTAMQLQILERIFDQGTGTPSKERIKEITAELSQHGQISETNVYNWFQNRRARSKRKQQNVAPGVNAESEVETEVDSKDKKTKSDDFWSQLSVSAGPSDNLGFQNHEDLQYLNENPESNKPDSVFPSDGSIRPTRNFNHVPVFDGLLSNPGSDYLTGKMEAPENYNLYQPSDDFDMAG* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01112 267 Gene3D - 86 151 - -
Lapu1g01112 267 PANTHER WUSCHEL-RELATED HOMEOBOX 13 5 265 IPR044559 GO:0003700
Lapu1g01112 267 MobiDBLite consensus disorder prediction 160 175 - -
Lapu1g01112 267 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Lapu1g01112 267 CDD homeodomain 85 147 IPR001356 GO:0003677
Lapu1g01112 267 Pfam Homeodomain 85 145 IPR001356 GO:0003677
Lapu1g01112 267 SUPERFAMILY Homeodomain-like 83 148 IPR009057 -
Lapu1g01112 267 SMART HOX_1 83 150 IPR001356 GO:0003677
Lapu1g01112 267 MobiDBLite consensus disorder prediction 143 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01112 Lapu-Chr1 24201319 24204798 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01112 21 267 Wox Gene Family AT4G35550 53.815 1.09e-79 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lapu1g01112 Homeodomain 4.4e-18 CL0123