Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01105 ATGATCTTTAGGACACTTGTCCTATTTCTGACTTTTATGGTGACAAATTCAATAGCTCTCGCGGATCAACAGACATACATAGTTCACATTGACAAGACCAAGATCAAAGCCTCCATTCATTCTCAAGACAACTCAAAACCGTGGTTTGAATCCATCATTGATTTCATTTCTGAAGCTTCAATGCAAGAAGAGGGAGAAGAGATTTTAGCTCCTCAGCTCCTTTATGCATATGAAACCAGCATGTTTGGTTTTGCTGCCCATCTTTCCAAGAAACACCTCAAATACTTGAACCAAGTTGAGGCTTTCCTTTCAGCCATACCTGATGAACTATCAACACTCCACACGACATACACCCCACACTTTCTTGGCCTAAGGAGTGGAAGAGCTCTTTGGACTGCTTCTAACTTGGGCATTGATGTGATCATTGGGGTTCTTGATTCAGGAATATGGCCTGAACACACCAGTTTCCAAGACTCAGGCTTGTCCCCAGTGCCTTCTCATTGGAAAGGTGTTTGTGAGAAAGGCACTAAGTTCTCTTCCTCAAATTGCAACAAAAAGCTTATTGGAGCAAGAGCCTATTTCAAAGGGTATGAAAAATATTTTGGAAAGAAAATCAATGAAACAGTGGATTACATTTCTCCAAGAGACTCCCAAGGGCATGGGACTCACACTGCCTCAACTGCAGCTGGTAATGTGGTGAAAAATGCCGACTTTTTGAGCCAGGCTAGAGGTACAGCAACTGGAATGAGGTATACTTCTAGAATTGCAGCTTATAAAGTATGCTGGTCTTCTGGTTGTACTAATTCTGATGTATTAGCTGCTATGGACCAAGCAGTTTCTGATGGGGTTGATGTGTTGTCACTCTCTTTAGGGAGTATTCCCAAACCTTTTTATAGTGATAGTATTGCCATAGCTTCATTTGGGGCAACCGAGAAAGGGGTTTTGGTTGCTTGCTCCGCAGGCAATTCAGGCCCCTTTCCATCAACCGTTGGAAATGGTGCCCCATGGATCATGACAGTTGCTGCTAGCTCCACCGACCGAACCTTTCCCACAAAAGTAAAGCTTGGGAATGGACAAATTTTCGAAGGGTCATCTTTATATCAAGGTAAGAAGACAAACCAATTGCCCCTTGTCTATGGCAAATCTGCAGGTACAACTAAGGAAGCACAGTATTGCACTGGAGGCTCCCTTGATCCAAAGCTTGTGCATGGGAAAATAGTTGCTTGTGAAAGAGGAATAAATGGTAGAACTGAGAAAGGAGAGGAAGTGAAAGTGGTAGGTGGGGCAGGAATGATACTACTCAACAATGAATATCAAGGAGAAGAGCTTTTTGCTGACCCTCATATTTTGTCAGCCACATCCTTAGGGGCTTCAGCAAGTAAGATTGTTAGAAGCTATAGTCAATCAGTTAAAAAACCAACAGTTTCAATTTCCTTTATGGGGACAAGATTCGGGGACCCTGCACCAGTGATGGCGGCATTTTCTTCTAGAGGACCAAGTTTAGTGGGACCAGACGTGATTAAGCCTGATGTGACTGCACCTGGTGTGAACATCTTGGCAGCTTGGCCACCCAAAATTAGCCCAAGCTTTCTCAAGAGTGACAAAAGAAAAGTATTATTTAACATACTTTCTGGTACTTCAATGTCTTGTCCTCATGTTAGTGGTATAGCAGCACTGCTCAAGTCTTTGCACAGAGACTGGTCCCCTTCAGCCATTAAATCTGCTCTGATGACTACCGCTTACACATTGAACAACAAAGGAGCTCCAATTTCAGACATGGCCTCTAATAACTCAACATTGGCTACACCCTTTGTATTTGGTTCAGGCCATGTTAACCCTGTGAGTGCTTCTGATCCAGGGTTAGTATATGATATCAGCACCAAAGACTATTTAAATTATTTTTGTAGCATAAACTATACTTCTTCCCAGATTGCTTTATTATCAAGAAGTAACTTTGTTTGTTCTAAAAAAACAGTTCTACAAGCTGGTGACTTGAACTACCCTTCATTTGCTGTTCTATTTGGCAGAAGTGCCTTTAATGCTAGTGTGACATACAGGAGGGTTGTCACAAATGTTGGAAAATCCCATAGTTCTTATGCAGTTAAAGTGGAACAACCGAATGGAGTTTCAGTTACTGTTGAACCAAGGAAATTGAAGTTTGAAAAACTGGGTAAAAAATTAAGCTATAGTGTGACATTTTTGGCAACTGGAGGAGCTAAAGTTCCTGGTACCTCATCATTTGGGTCACTAATTTGGGTATCTGACAGATATAAAGTTAGAAGTCCTATAGCAATAACCTGGCAATAG 2307 0.4179 MIFRTLVLFLTFMVTNSIALADQQTYIVHIDKTKIKASIHSQDNSKPWFESIIDFISEASMQEEGEEILAPQLLYAYETSMFGFAAHLSKKHLKYLNQVEAFLSAIPDELSTLHTTYTPHFLGLRSGRALWTASNLGIDVIIGVLDSGIWPEHTSFQDSGLSPVPSHWKGVCEKGTKFSSSNCNKKLIGARAYFKGYEKYFGKKINETVDYISPRDSQGHGTHTASTAAGNVVKNADFLSQARGTATGMRYTSRIAAYKVCWSSGCTNSDVLAAMDQAVSDGVDVLSLSLGSIPKPFYSDSIAIASFGATEKGVLVACSAGNSGPFPSTVGNGAPWIMTVAASSTDRTFPTKVKLGNGQIFEGSSLYQGKKTNQLPLVYGKSAGTTKEAQYCTGGSLDPKLVHGKIVACERGINGRTEKGEEVKVVGGAGMILLNNEYQGEELFADPHILSATSLGASASKIVRSYSQSVKKPTVSISFMGTRFGDPAPVMAAFSSRGPSLVGPDVIKPDVTAPGVNILAAWPPKISPSFLKSDKRKVLFNILSGTSMSCPHVSGIAALLKSLHRDWSPSAIKSALMTTAYTLNNKGAPISDMASNNSTLATPFVFGSGHVNPVSASDPGLVYDISTKDYLNYFCSINYTSSQIALLSRSNFVCSKKTVLQAGDLNYPSFAVLFGRSAFNASVTYRRVVTNVGKSHSSYAVKVEQPNGVSVTVEPRKLKFEKLGKKLSYSVTFLATGGAKVPGTSSFGSLIWVSDRYKVRSPIAITWQ* 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01105 768 Gene3D Peptidase S8/S53 domain 139 630 IPR036852 GO:0004252|GO:0006508
Lapu1g01105 768 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 142 153 IPR023827 -
Lapu1g01105 768 ProSiteProfiles Serine proteases, subtilase domain profile. 116 617 - -
Lapu1g01105 768 Pfam Subtilase family 139 586 IPR000209 GO:0006508|GO:0008236
Lapu1g01105 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Lapu1g01105 768 CDD Peptidases_S8_3 112 581 IPR034197 -
Lapu1g01105 768 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Lapu1g01105 768 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Lapu1g01105 768 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Lapu1g01105 768 Pfam PA domain 376 451 IPR003137 -
Lapu1g01105 768 Gene3D - 634 767 - -
Lapu1g01105 768 FunFam Subtilisin-like protease SBT1.5 139 357 - -
Lapu1g01105 768 SUPERFAMILY Subtilisin-like 113 621 IPR036852 GO:0004252|GO:0006508
Lapu1g01105 768 CDD PA_subtilisin_like 353 477 - -
Lapu1g01105 768 Pfam Fibronectin type-III domain 664 765 IPR041469 -
Lapu1g01105 768 FunFam Subtilisin-like protease SBT1.5 634 768 - -
Lapu1g01105 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 764 IPR045051 -
Lapu1g01105 768 FunFam subtilisin-like protease SBT1.5 346 484 - -
Lapu1g01105 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 114 IPR037045 -
Lapu1g01105 768 Gene3D - 346 484 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01105 Lapu-Chr1 24139353 24142565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01105 23 768 Subtilisin-like Serine Gene Family AT1G01900 54.679 0.0 804
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01105 - - gmx:100790006 1367.44