Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01088 ATGGCCAGAAAAAACGAGGGATGTGCAGTGGGAATAGACCTTGGAACAACGTACTCTTGTGTTGCAGTATGGCAGGAGCAGCACCGTAGAGTTGAGATCATCCACAATGACCAAGGCAACAACATCACTCCTTCTTTTGTTGCTTTCACTGACAAACAAAGATTGATTGGTGACGCGGCTAAAAACCAGGCTGCCACCAATCCAGAGAACACTGTGTTTGATGCTAAAAGATTAATTGGTAGGAAATACAGTGATCCAATTGTTGAAAAAGATAAAATGTTGTGGCCATTCAAGGTCGTTGCTGGTGTTAATGACAAACCCATGATTGTAGTTAACTACAAGGGTCAGAAAAAGTACCTTTCAGCAGAAGAAATATCATCTATGGTCCTCTCAAAGATGCGGGAGATTGCAGAGACCTTTCTGGAAACACCTGTAAGTAATGCAGTGGTTACTGTGCCTGCTCATTTCAATGACTCTCAGCGTAAAGCTACAGTAGATGCTGGAACCATTGCTGGCCTCAACGTTTTGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCATATGGTCTTGACAAGAGAACCACTTGTGTTGGAGAGCGAAATATTTTCGTGTTTGACCTTGGTGGTGGTACCTTTGACGTGTCTATACTCACAATTAAGGATAAGGTGTTCCAAGTTAAGGCTACTGCAGGAAACACTCACCTCGGGGGAGAGGACATTGATAACAGAATGGTGGAGTACTTTGTAGAACAGTTCAAAAGGAAATATAAAGAGGACATTGGTGGGAATCCAAGAGCTCTAAGGAGGTTGAGAAGTGCATGCGAGAGGGCAAAAAGAACACTCTCGTGTACACTGACTACCAACATTGAGATAGATGCTTTATTTCAAGGCATTGACTTTAGTTCTTCAATCACTCGTGCAAAGTTTGATGAAATCAATATGGAGCTCTTTGAAGAGTGTATGGAGACCGTAGATAGGTGTCTTAGTGATGCTAAGATGGAGAAGAACAGTGTGCATGATGTTGTACTTGTTGGTGGCTCTTCCAGGATTCCTAAAGTGCAGCAACTATTACAGGAGTTCTTCGAGGGCAAGGATCTGTGCAAGAGCATCAACCCTGACGAAGCTGTTGCATACGGAGCAGCTGTGCAAGCTGGTTTGTTGTGTGAAGGCATTAAGAATGTTCCAGACTTGGTGTTGTTGGATGTAACACCGTTGTCACTT 1224 0.4346 MARKNEGCAVGIDLGTTYSCVAVWQEQHRRVEIIHNDQGNNITPSFVAFTDKQRLIGDAAKNQAATNPENTVFDAKRLIGRKYSDPIVEKDKMLWPFKVVAGVNDKPMIVVNYKGQKKYLSAEEISSMVLSKMREIAETFLETPVSNAVVTVPAHFNDSQRKATVDAGTIAGLNVLRIINEPTAAAIAYGLDKRTTCVGERNIFVFDLGGGTFDVSILTIKDKVFQVKATAGNTHLGGEDIDNRMVEYFVEQFKRKYKEDIGGNPRALRRLRSACERAKRTLSCTLTTNIEIDALFQGIDFSSSITRAKFDEINMELFEECMETVDRCLSDAKMEKNSVHDVVLVGGSSRIPKVQQLLQEFFEGKDLCKSINPDEAVAYGAAVQAGLLCEGIKNVPDLVLLDVTPLSL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01088 408 SUPERFAMILY Actin-like ATPase domain 200 388 IPR043129 -
Lapu1g01088 408 FunFam Heat shock protein 70 10 201 - -
Lapu1g01088 408 Gene3D - 194 368 - -
Lapu1g01088 408 FunFam Heat shock 70 kDa 237 320 - -
Lapu1g01088 408 Gene3D - 10 385 - -
Lapu1g01088 408 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lapu1g01088 408 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lapu1g01088 408 PRINTS 70kDa heat shock protein signature 397 408 - -
Lapu1g01088 408 PRINTS 70kDa heat shock protein signature 148 168 - -
Lapu1g01088 408 PRINTS 70kDa heat shock protein signature 371 391 - -
Lapu1g01088 408 PRINTS 70kDa heat shock protein signature 8 21 - -
Lapu1g01088 408 PRINTS 70kDa heat shock protein signature 60 68 - -
Lapu1g01088 408 PRINTS 70kDa heat shock protein signature 211 221 - -
Lapu1g01088 408 PRINTS 70kDa heat shock protein signature 38 50 - -
Lapu1g01088 408 PRINTS 70kDa heat shock protein signature 339 355 - -
Lapu1g01088 408 FunFam heat shock 70 kDa protein-like 73 128 - -
Lapu1g01088 408 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lapu1g01088 408 PANTHER HEAT SHOCK PROTEIN 70KDA 9 408 IPR013126 GO:0005524|GO:0140662
Lapu1g01088 408 Pfam Hsp70 protein 9 408 IPR013126 GO:0005524|GO:0140662
Lapu1g01088 408 FunFam Heat shock cognate 70 kDa protein 2 321 368 - -
Lapu1g01088 408 SUPERFAMILY Actin-like ATPase domain 9 193 IPR043129 -
Lapu1g01088 408 Gene3D - 73 128 - -
Lapu1g01088 408 Gene3D Actin; Chain A, domain 4 237 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01088 Lapu-Chr1 24031830 24033163 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01088 1 408 Calmodulin-binding Proteins AT3G12580 75.306 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01088 K03283 - gmx:102667578 681.019