Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu1g01085 | ATGAGTGTTGTGATTCCTAGGAATACAACTATTCCAGTTAAGAAGACCCAAATATATCATACATCAGAAGATAACCAAATCTCTGCGTACATTGGTGTTTATGAAGGTGAGAGAAGCAGGGCAAGTGATAACAATTTGTTGGGTTTCTTTAGTCTTTCTGGTTTGTCTCCTGCTCCTCGTGGCCATCCTTTGGATGTTTGCTTTACCATAGATGCAAATGGCACCCTGTCTGTTTCTGCCGAGGATACAACCGCCGGTTATAAGAATGAGATTACCATAACTAATGACCAAAAAGGACTTTCAGCAGAAGAAATTAAAAGAATGATTCAAGAAGCTGAAAATTATAAAGCTGATGATATAAAGTTCATGGAGAAGGTCAATGCAATGAATGCTTTGGATGACTATGTTTACAAGATGAAGAATGCACTGAAGAACAACAATATAGGTTCAAGACTTCCTTTAAAAGAAAGGGAGAAGATCAAGTCTGCAATTACCAAAGCTGCAAAGTTGCTTGGTGATGACAACCAGCAGCATGGAGTAGAGTTGATTGAGGATTATCTGAATGAGCTCATGGACCTTTTTGACTGTGTCATTGGCAACTTTGGTTAG | 609 | 0.3875 | MSVVIPRNTTIPVKKTQIYHTSEDNQISAYIGVYEGERSRASDNNLLGFFSLSGLSPAPRGHPLDVCFTIDANGTLSVSAEDTTAGYKNEITITNDQKGLSAEEIKRMIQEAENYKADDIKFMEKVNAMNALDDYVYKMKNALKNNNIGSRLPLKEREKIKSAITKAAKLLGDDNQQHGVELIEDYLNELMDLFDCVIGNFG* | 203 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu1g01085 | 202 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 128 | 197 | IPR029048 | - | |
Lapu1g01085 | 202 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 1 | 129 | IPR029047 | - | |
Lapu1g01085 | 202 | Gene3D | - | 130 | 201 | IPR029048 | - | |
Lapu1g01085 | 202 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 166 | IPR013126 | GO:0005524|GO:0140662 | |
Lapu1g01085 | 202 | Pfam | Hsp70 protein | 2 | 189 | IPR013126 | GO:0005524|GO:0140662 | |
Lapu1g01085 | 202 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 1 | 133 | IPR029047 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu1g01085 | Lapu-Chr1 | 24009369 | 24018284 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu1g01085 | 1 | 201 | Calmodulin-binding Proteins | AT3G12580 | 53.960 | 2.90e-64 | 207 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu1g01085 | K03283 | - | gmx:102667578 | 231.106 |