Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01084 ATGGCCAAAGGTCAGGGAATTGCTATAGGAATTGACCTGGGTACATCCTACTCGTGTGTTGCAGTGTGGCTGGAGAAACAAAATAGAGTAGAAATAATTCACAACGACCAAGGGAACAGAACTACACCTTCTTTTGTTGCTTTCACAGATGATCAGAGGTTGATTGGTGAAGCTGCCAAGAATCAGGCTGCAACCAACCCAGAAAACACTGTCTTTGATGCCAAGAGGTTAATCGGAAGGAAATACAGTGATCCCATTACTCAAAGTGATACAATGTTGTGGCCGTTCAAGGTCATTGCTGATGATGATGACAAACCCATGATTGTGGTTAACCACAAGGGGCAGGAGAAGCACCTTTCAGCTGTGGAGATATCATCTATGATCCTCATGAAGATGCGGGAGATTGCTGATGCATATCTGGAAACACCTGTGAAGAATGCTGTTGTTACTGTACCAGCTTATTTCAATGACTCTCAGCGTAAAGCCACAGTGGATGCTGGAACCATTGCTGGCCTTAATGTTATTCGGATAATCAATGAGCCCACTGCAGCAGCTATTGCATATGGCCTTGACAAGAGACCTAATTGTGTTGAAGAGCGAAACATATTCATCTTCGACCTTGGTGGTGGTACTTTTGACGTTTCTCTCCTTACAATTAAGGATAATGTCTTCCGTGTGAAGGCTACTGCAGGAAACACTCACCTTGGGGAGAGGACTTTGACAACAGAATGGTGA 735 0.4422 MAKGQGIAIGIDLGTSYSCVAVWLEKQNRVEIIHNDQGNRTTPSFVAFTDDQRLIGEAAKNQAATNPENTVFDAKRLIGRKYSDPITQSDTMLWPFKVIADDDDKPMIVVNHKGQEKHLSAVEISSMILMKMREIADAYLETPVKNAVVTVPAYFNDSQRKATVDAGTIAGLNVIRIINEPTAAAIAYGLDKRPNCVEERNIFIFDLGGGTFDVSLLTIKDNVFRVKATAGNTHLGERTLTTEW* 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01084 244 FunFam Heat shock protein 70 9 201 - -
Lapu1g01084 244 PANTHER HEAT SHOCK PROTEIN 70KDA 8 238 IPR013126 GO:0005524|GO:0140662
Lapu1g01084 244 SUPERFAMILY Actin-like ATPase domain 198 240 IPR043129 -
Lapu1g01084 244 SUPERFAMILY Actin-like ATPase domain 7 192 IPR043129 -
Lapu1g01084 244 FunFam heat shock 70 kDa protein-like 72 127 - -
Lapu1g01084 244 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Lapu1g01084 244 Gene3D - 1 200 - -
Lapu1g01084 244 ProSitePatterns Heat shock hsp70 proteins family signature 2. 204 217 IPR018181 -
Lapu1g01084 244 PRINTS 70kDa heat shock protein signature 210 220 - -
Lapu1g01084 244 PRINTS 70kDa heat shock protein signature 7 20 - -
Lapu1g01084 244 PRINTS 70kDa heat shock protein signature 37 49 - -
Lapu1g01084 244 PRINTS 70kDa heat shock protein signature 59 67 - -
Lapu1g01084 244 PRINTS 70kDa heat shock protein signature 147 167 - -
Lapu1g01084 244 Gene3D - 201 242 - -
Lapu1g01084 244 Pfam Hsp70 protein 8 237 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01084 Lapu-Chr1 24005371 24006776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01084 2 236 Calmodulin-binding Proteins AT3G12580 74.468 7.50e-126 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01084 K03283 - gmx:100804476 413.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01084 1 24005371 24006776 Lapu1g01084 1 24005371 24006776 ECH