Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01083 ATGGCCAAAGACAATAGGGGATTGGTTATAGGAATCGACCTTGGCACAACATACTCGTGTGTAGCAGTATGGCAGGAACAACATAATAGGGTGGAGATCATCCATAATGACCAAGGCAACAACACCACTCCTTCCTGTGTTGCTTTCACGGACCATGAAAGGTTGATAGGAGATGCTGCTAGAAATCAGGCTGCTACCAATCCAGAGAACACCATCTTCGATGCTAAGAGGTTGATCGGTAGAAAATACAGTGACCCTGTTGTTCAAAAAGATAAAATGTCGTGGCCATTTAATGTTGTTTCCGGTATTAACGACAAACCTATGATTTCTGTAAAGTACAAGGGTCAGGAGAAGCACCTTTGTGCGGAGGAAGTATCATCCATGGTCCTCGCAAAGATGCGGGACATTGCAGAGGCATACTTGGAAAAGCCTGTGAAGAATGCAGTGGTTACTGTACCTGCCTATTTCAATGATTCTCAGCGGAAAGCTACCATGGATGCTGGTGCTATTATCGGCCTCAATGTTATTCGTATAATCAATGAACCCACCGCTGCAGCAATTGCATATGGTCTTGATAAGAGAAATGATTGTGTTGGAGAGCGAAATATCTTTATTTTTGACTTTGGTGGTGGTACATTCGATGTGTCTCTTCTCACTATTAAGCCCAAGCTCTTCCAAGTCAAGGCCACTGCAGGGAACACTCACCTTGGCGGAGAGGACATTGATAATAGAATGGTGAACTATTTTGTGCAGGAGATGAAGAGGAAAAATAAAGTGGACATAAGTGGGAATCCACGAGCCCTGAGGAGGTTGAAAAGTGCTTGTGAAAGAGCAAAAAGGGCCCTCTCATATGCCGTTACTACAAACATTGAGGTAGATAGTTTATTTCAAGGCATTGATTTGTGTTCTTCAATAACCCGTGCGAAATTTGAAGAAATCAATATGGAGCTCTTTGAAGAGTGTATGGAGACAGTAGATAAGTGTCTTAGGGATGCTAAGATGGACAAAAGCAGTGTGCATGATGTTGTCCTTGTTGGTGGTTCTTCTAGGATTCCCAAAGTGCAGCAGCTACTGCAAGACTTTTTCAATGGGAAAGATCTTTGCAAGAGCGTAAACCCCGATGAGGCTGTTGCTTATGGTGCAGCTGTGCAGGCTGCTTTGTTGAGTGAAGGCATTAAGAATGTCCCGGATTTGGTATTGAAAGATGTTACTCCGCTTTCACTTGGTACGAGTATTGTAGGGGATGTCATGAGTGTTGTGATTCCTAGGAATACTACTATTCCTGTAAAGAGGTCGAAAGAATATATTACAGTTAAAGACAACCAATTCTCAACTCATATCGAGGTTTATGAGGGTGAGAGAACTAGAGCCAGTGATAATAATATGTTGGGTTCTTTTGTTCTTTCTGGCTTTCCTCCTGCTCCTCGTGGCTATGCTTTTGATGTGACTTTTGCACTAAATGACAATGGCATTCTATCCGTTTCTGCTGAGGATAGAACAACCGGTAATAAGAATGAAATTACAATAACCAATGAGAAAGAAAGACTATCGGCTGCAGAAATTAGTACAATGATTCAAGAAGCGGAGAATTACAAGTCTGAAGATGAGAAGTTTCTTAGGAAGGCCAATGCAATGAATGATTTAGATTATTATGTTTACAAGATCAGAAAGGTTTTAACGAAAAAGGATATCAGCTCGAAGTTTAGCTCCAAAGAAAATGAAGATATCAGTTCTACAATTACTAGAGCCACGGATATGCTAGATGGTCTGAACCATATGGAAGATATAATTGCTATTGAAGAGTGTCTGAAAGAGCTTAAA 1821 0.413 MAKDNRGLVIGIDLGTTYSCVAVWQEQHNRVEIIHNDQGNNTTPSCVAFTDHERLIGDAARNQAATNPENTIFDAKRLIGRKYSDPVVQKDKMSWPFNVVSGINDKPMISVKYKGQEKHLCAEEVSSMVLAKMRDIAEAYLEKPVKNAVVTVPAYFNDSQRKATMDAGAIIGLNVIRIINEPTAAAIAYGLDKRNDCVGERNIFIFDFGGGTFDVSLLTIKPKLFQVKATAGNTHLGGEDIDNRMVNYFVQEMKRKNKVDISGNPRALRRLKSACERAKRALSYAVTTNIEVDSLFQGIDLCSSITRAKFEEINMELFEECMETVDKCLRDAKMDKSSVHDVVLVGGSSRIPKVQQLLQDFFNGKDLCKSVNPDEAVAYGAAVQAALLSEGIKNVPDLVLKDVTPLSLGTSIVGDVMSVVIPRNTTIPVKRSKEYITVKDNQFSTHIEVYEGERTRASDNNMLGSFVLSGFPPAPRGYAFDVTFALNDNGILSVSAEDRTTGNKNEITITNEKERLSAAEISTMIQEAENYKSEDEKFLRKANAMNDLDYYVYKIRKVLTKKDISSKFSSKENEDISSTITRATDMLDGLNHMEDIIAIEECLKELK 607
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01083 607 PANTHER HEAT SHOCK PROTEIN 70KDA 9 570 IPR013126 GO:0005524|GO:0140662
Lapu1g01083 607 FunFam Heat shock 70 kDa protein 391 545 - -
Lapu1g01083 607 Gene3D - 73 128 - -
Lapu1g01083 607 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 607 IPR029048 -
Lapu1g01083 607 FunFam Heat shock cognate 70 kDa protein 2 321 368 - -
Lapu1g01083 607 SUPERFAMILY Actin-like ATPase domain 200 389 IPR043129 -
Lapu1g01083 607 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lapu1g01083 607 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Lapu1g01083 607 Pfam Hsp70 protein 9 598 IPR013126 GO:0005524|GO:0140662
Lapu1g01083 607 Gene3D - 10 386 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 339 355 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 477 493 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 8 21 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 371 391 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 60 68 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 211 221 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 397 416 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 148 168 - -
Lapu1g01083 607 PRINTS 70kDa heat shock protein signature 38 50 - -
Lapu1g01083 607 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 388 568 IPR029047 -
Lapu1g01083 607 FunFam heat shock 70 kDa protein-like 73 128 - -
Lapu1g01083 607 Gene3D - 194 368 - -
Lapu1g01083 607 ProSitePatterns Heat shock hsp70 proteins family signature 3. 342 356 IPR018181 -
Lapu1g01083 607 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 394 549 IPR029047 -
Lapu1g01083 607 Gene3D Actin; Chain A, domain 4 237 320 - -
Lapu1g01083 607 SUPERFAMILY Actin-like ATPase domain 7 193 IPR043129 -
Lapu1g01083 607 FunFam Heat shock protein 70 10 201 - -
Lapu1g01083 607 FunFam Heat shock 70 kDa 237 320 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lapu1g01083 Lapu-Chr1 24004248 24013724 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01083 1 607 Calmodulin-binding Proteins AT3G12580 67.488 0.0 837
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01083 K03283 - gmx:102667578 973