Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01066 ATGGCCTTACAGAATATTGGTGCTAGTAACAGTGATGATGCCTTCTATAGGTACAAGATGCCTAGAATGATCACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACAAATATTGTCAATATGGTTGATATTGCGAAAGCCTTGGCTAGGCCAGCTTCGTACACAACGAAGTATTTTGGATGTGAGCTTGGAGCCCAATCAAAATTTGATGAGAAAACTGGGACTTCTCATGTTAATGGTGCACATGATACTGCAAAACTTGCTGGCCTTCTTGAGATCTTCATCAAGAAATATGTTCAGTGTTATGGTTGTGGAAATCCTGAAACTGAGATCTTAATTACTAAGAACCAAATGATCCAGCTGAAATGTGCTGCTTGTGGGTTTGTGTCTGATGTTGATATGAGAGACAAGCTAACTACTTTCATTGTTAAGAACCCTCCAGAAGTTAAGAAAGGTTCCAAAGACAAGAAGGCCATGAGGAGAGCTGAGAAAGAGAGACTGAAGGAAGGTGAAATGGCTGATGAGGAACAGAAAAAATTGAAGAAAGAGATTGTTAAGAAGAAAGGAACTTCATCTTCTAAGGATGGTGCTCCAAAGTCCACCTCTTCAAGGAAAAAGGCAAATGGCTCTGATGAAGACCGGGCGTCTCCTCCTCGCAATCAAATTGATGAGAAGGATGAGGCTTATGACAAGGAAGATGTGGATGATGACATAGAATGGCAAACGGATACATCACTGGAGGCTGCTCGCCAAAGAATCCAGGAACAGTTGAGTGCTGTGACAGCTGATATGGTCATGCTATCCACAGATGAACCAGAGAAGAAGGAGAAAGCCGGACCTAAGGTAAGTGATAATTCTGAGAATGGTAACTCCTTGACCTACAGGACACTGGTTGCAGAAATCAAAGCAAATTTGAGTAAAGGTGTCAAGGCAAAAGAGTTGGTGTCCCATCTAGCAGCACTTACTGCATCAGATCAGGAAAAGATGAGTGCTCTGTATGAAGCTCTGTTTGAGGGCATCGAGAAAGGATTTGCAAAAGAAGCAATTAAGAAGAAGAACTACCTTGCTGCTGCAGTTGCGGAGGATGAGGGTTTGCAGTTGTTACTGCTGTGTGCAATTGAGGAATTTTCTTGCAAGTCTACTTCCAATGCGTTGAAGGAAGTTGCCCTGGTTCTGAAGGCACTCTACGATGCTGATGTGTTGGAGGAAGAGCACATAGTGCAGTGGTATCAAAAGGGACTGAAGGGCGATAACAAGAACTCTCAGATTTGGAAGAATGCTCAGCCGTTCATTGAATGGCTCCAGAATGCAGAATCTGAATCGGATGAAGAATAA 1335 0.4285 MALQNIGASNSDDAFYRYKMPRMITKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTAKLAGLLEIFIKKYVQCYGCGNPETEILITKNQMIQLKCAACGFVSDVDMRDKLTTFIVKNPPEVKKGSKDKKAMRRAEKERLKEGEMADEEQKKLKKEIVKKKGTSSSKDGAPKSTSSRKKANGSDEDRASPPRNQIDEKDEAYDKEDVDDDIEWQTDTSLEAARQRIQEQLSAVTADMVMLSTDEPEKKEKAGPKVSDNSENGNSLTYRTLVAEIKANLSKGVKAKELVSHLAALTASDQEKMSALYEALFEGIEKGFAKEAIKKKNYLAAAVAEDEGLQLLLLCAIEEFSCKSTSNALKEVALVLKALYDADVLEEEHIVQWYQKGLKGDNKNSQIWKNAQPFIEWLQNAESESDEE* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01066 444 Pfam eIF4-gamma/eIF5/eIF2-epsilon 366 444 IPR003307 GO:0005515
Lapu1g01066 444 MobiDBLite consensus disorder prediction 148 227 - -
Lapu1g01066 444 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 443 IPR045196 GO:0003743|GO:0006413
Lapu1g01066 444 Gene3D - 105 145 - -
Lapu1g01066 444 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Lapu1g01066 444 Gene3D - 2 104 - -
Lapu1g01066 444 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Lapu1g01066 444 CDD W2_eIF5 297 442 - -
Lapu1g01066 444 ProSiteProfiles W2 domain profile. 284 444 IPR003307 GO:0005515
Lapu1g01066 444 Gene3D - 285 444 - -
Lapu1g01066 444 FunFam Eukaryotic translation initiation factor 5 290 435 - -
Lapu1g01066 444 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Lapu1g01066 444 SUPERFAMILY ARM repeat 294 438 IPR016024 -
Lapu1g01066 444 MobiDBLite consensus disorder prediction 147 237 - -
Lapu1g01066 444 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Lapu1g01066 444 SMART 542_3 352 440 IPR003307 GO:0005515
Lapu1g01066 444 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Lapu1g01066 444 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01066 Lapu-Chr1 23889901 23893658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01066 1 437 Eukaryotic Initiation Factors Gene Family AT1G36730 63.758 1.40e-180 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01066 K03262 - gmx:100777906 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01066 1 23889901 23893658 Lapu1g01066 1 23889901 23893658 ECH