Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01044 ATGAATGATTCCACCGTGAAGAGTTTGGCTATCACGGAGAAGAAGGTGCATCAGAAGCCTGGTGGTTGTGTTGGCATTTTTTTCCAGCTCATTGATTGGAAGAGAAAACTCTCAAAGAAGAAGCTCTTCTCCAAGAAGCTTCTTCCTCCTGCTCGTGCGAAAAAGTTTAAGGGGGATGAAAAGATGCCAAATTCCAAGAGTCACCTCATTGCTAATGAGAATAGTGGAGGTTTCCCTAGCGCCAAAAAAGGTGGGAATCATGGCTTAGATGTGGAGCAAAAGAGTGAAATGCGAGTTCCGAGTCTGGTAGCCAGGTTGATGGGTCTAGAATCTATTCCGACTGCTCAGCGAGATAAATCCAAGAAAGCCTTGTGTGATGATGGGAAGAATGAGTCTGTGAGTGGTGACCAATGTGAGTTGGATAGGCAAGGCACGGGTTTGGAAATGGGAGTTGTGAAGCATGATTCTAGACCTCAGAAGCTTCAGAAGACCGGGTCCTATGAGAGAAGGGCAGTGACTAGGTTTGGAGCTGAGGCTTTCCAAATTAGGAGTGTGTTATCGCGAGGAAGAAAGTATCATCATCACCATCATCATCATCATCCGAAGCTTGCTTCTTTGAAGAGCCCGAGAATTCCTTCAGGAAAGAGTGCTTCTCGTAGCTCTAGGTTAATAGGAGCAGCTACTAAAATTTTGGAACCTGGACTGCAAAGCAGAAGTAGGGCCAAAAGTTCTCTTGCATACCCTGCTTCCATGTATCCTCCCAAGACTGGCATTGTGACAAATGATGTGCAAAATCAGTCTTGTTATGAAGCTGGCTCGTGCAAGCAATTGATGGGGCAGACCTCTTGCAAAAACTGTGGTAATTTGCTAGATGTAGTTGACTGCAAGCTTGAGGTTGGGGGACAGCCATTGGATCCTCCACCCGTTGTTTCAGATGTGATCATAGGTACCTCTATGGTATCACCAGAGAAGAAGGGAAAGTCATTCACTTCCCATGGACATGACAGAGATGTAGTTCTTCTGAGAAGTCAGGAAAAGCTCATATCTCTTGATACTGAGGAGAAGGTGAAAACTAATGCACATAAATCGTGGAGTGAACCCACTGTCAGAAGAATATCAATGCCCCATGATTGTCTACCTAAATGGAATTCATCTTGCCAACCATCAAGGACCATGGAGGATGACGCATCTTCTTTTCCCTCAAAACACAAAACTCAAACACAAGAACAGATGTTACGCAGTGGAAGATATTCATCTGGATCTACAATGAACGATATGCAAGTAAAAAGGGTATCATCATCTACATCTACGAGTACTATGAATGGGGCTAAAGACTTTGTTTCTGTGAATAGAAGTCTTAGTGGTCGAACAAGGACAAGATCACCTACCAAAGCGGATAATTCCAAACTTGACTTAGAGAGAAAGCCTTATAATCGACAGCATAATTCCTTGTCTCACGTAAGAACATTAGAGAGAAAAAGAAGAATCCCAAATGTTACACAACTAGAAGGCACAGGTTCTGTTTATTCAGTTGGTGCAAAACAGAGAAATCTCCATTCTAATGGATTGAGTGGCAAAAGGAGGGACTTCAATGCTTCCTCCTTGAACAATTCTACTGTAAAAAATAAGCAAGTTGCTCAAGGAGAAAGAGTTATTAAGGTTAATGACAATAAGATCAATGATGTAGTGTCATTTACATTTAATTCCCCCCTGAAACAAAAGATGGGAATAACTGTCGATAGAGAAGAGACAAGCAGTGACAATGAGAGTGTCCAAAGGCCTTCACCCTTGAGAGTTGATGCTTTAGGTGCCTTTCTAGAACAAAAATTGAAGGAATTAACCTCTCAAAGAGACGAAGAGTTGGCTACAGGTGCTCCACCTAAAAAATCAAGTGCCATGATTCTTCAAGAGCTGATATCTGCTTTAAGTTCAGAGCATTTGATCTGTCATGATGGTCATCATGTGTTTAATGAGAATGTCGGTTTTCATTACGGGGTAAAACAAGAAAGTTTATTGGGAACCTCTTGCAATGGTAATCATCTCAGTCCTGGTTCTGTTTTGGAAGCTTCCTTTTCTTCCAGTAGTCTGGATGAAAGCTCAGGGCATGGTTTTCACCCTGATTCCATGAATCACTTTTGTTATGGTCAACTAGAACATGATACTGAACTTTCGGATTCTGCAACATCCTTTACCAGAGGGAGGATAGGTGAGATACTGAGTGATCTTGTCAGCCAACTTCCCAGGGCATTGGAAAGTTTGCATACTTTTGGGACAAAATTAACAATAAGCAAGCTTAACCATGTGAAGGATATTCTCTTGCAAGCTGAGTTGGTGCTTGGAATAACAACTGATCGCAGAGAGGATGAAGGGTCTCAACTTCTAATTTATCGGTTTCTCGTTGATGATCTTGAGAGTATGACGAGTGATACTATGTGGACAGATGTGGGTTGTGAGGATTCTAAACAGAGAAAGGAACTAAAGGGTTTTCTCCTTGATTGTGTCGTAGAATATCTAGAATCAAACTGCAGCCAATATTTTAACTCTGGATTCAGGGCCTGGACAAAGTTACCTTTATGCATGAGAGCTGAGATGCTGGCTCAAGAGGTGAAGAGGGAGATCAACAAGTGGTTATCTATGGTTGGAATGGTACCTGATGAAATAATAGAATGGGAAATGAGCCACTCCTTGGGGAAATGGACCGACTTTGATATTGAAGCATTTGGGGCTGGTGTTGATGTAGATGGGGATATACTTCAAATTTTGATTGATGAAGTTGTTGAAGACCTTGTGGATTGCACTCACGGCTCCATCTCCTAA 2817 0.4221 MNDSTVKSLAITEKKVHQKPGGCVGIFFQLIDWKRKLSKKKLFSKKLLPPARAKKFKGDEKMPNSKSHLIANENSGGFPSAKKGGNHGLDVEQKSEMRVPSLVARLMGLESIPTAQRDKSKKALCDDGKNESVSGDQCELDRQGTGLEMGVVKHDSRPQKLQKTGSYERRAVTRFGAEAFQIRSVLSRGRKYHHHHHHHHPKLASLKSPRIPSGKSASRSSRLIGAATKILEPGLQSRSRAKSSLAYPASMYPPKTGIVTNDVQNQSCYEAGSCKQLMGQTSCKNCGNLLDVVDCKLEVGGQPLDPPPVVSDVIIGTSMVSPEKKGKSFTSHGHDRDVVLLRSQEKLISLDTEEKVKTNAHKSWSEPTVRRISMPHDCLPKWNSSCQPSRTMEDDASSFPSKHKTQTQEQMLRSGRYSSGSTMNDMQVKRVSSSTSTSTMNGAKDFVSVNRSLSGRTRTRSPTKADNSKLDLERKPYNRQHNSLSHVRTLERKRRIPNVTQLEGTGSVYSVGAKQRNLHSNGLSGKRRDFNASSLNNSTVKNKQVAQGERVIKVNDNKINDVVSFTFNSPLKQKMGITVDREETSSDNESVQRPSPLRVDALGAFLEQKLKELTSQRDEELATGAPPKKSSAMILQELISALSSEHLICHDGHHVFNENVGFHYGVKQESLLGTSCNGNHLSPGSVLEASFSSSSLDESSGHGFHPDSMNHFCYGQLEHDTELSDSATSFTRGRIGEILSDLVSQLPRALESLHTFGTKLTISKLNHVKDILLQAELVLGITTDRREDEGSQLLIYRFLVDDLESMTSDTMWTDVGCEDSKQRKELKGFLLDCVVEYLESNCSQYFNSGFRAWTKLPLCMRAEMLAQEVKREINKWLSMVGMVPDEIIEWEMSHSLGKWTDFDIEAFGAGVDVDGDILQILIDEVVEDLVDCTHGSIS* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01044 938 Pfam DUF761-associated sequence motif 92 118 IPR032795 -
Lapu1g01044 938 MobiDBLite consensus disorder prediction 383 461 - -
Lapu1g01044 938 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 8 928 - -
Lapu1g01044 938 MobiDBLite consensus disorder prediction 189 219 - -
Lapu1g01044 938 MobiDBLite consensus disorder prediction 517 542 - -
Lapu1g01044 938 MobiDBLite consensus disorder prediction 383 487 - -
Lapu1g01044 938 MobiDBLite consensus disorder prediction 189 205 - -
Lapu1g01044 938 MobiDBLite consensus disorder prediction 462 487 - -
Lapu1g01044 938 Pfam Domain of unknown function (DUF4378) 765 924 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01044 Lapu-Chr1 23682350 23687597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01044 1 929 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 30.777 1.93e-85 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01044 - - gmx:100813026 1504.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01044 1 23682350 23687597 Lapu1g01044 1 23682350 23687597 ECH