Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01026 ATGCGGATGAGCTGCAATGGATGTCGAGTTCTGAGAAAAGGTTGCAGTGAAAATTGCAGCATCAGACCCTGTTTACAATGGATCAAAAGCCCAGAATCTCAGGCCAATGCTACTGTGTTTCTCGCCAAGTTCTATGGCCGTGCTGGCCTCATGAATCTCGTTAACGCAGGCCCCGAACATCTCCGTCCAGCGATCTTCCGGTCGTTGTTGTACGAGGCATGCGGGCGGATAGTGAACCCGATTTACGGTTCAGTGGGTTTGTTGTGGTCGGGGAGCTGGCAGCTGTGTCAAGCCGCCGTGGAAAACGTCTTGAAAGGCGCGCCTATTACGCCGATCACGTCAGAAGCCGCTGCTAGCGGGCGGGGCCCACCCCTTAAGGCGTACGACATACGCCACGTGTCAAAAGATGAGAACTCCGCCGCGTCGAATGAAACTCAGCAGCAGCGAGTCAAGACTCGATCTCGGGTCAAGCGTCCCCTCGCCACCCCCAAGCCCAAATCCACCACCAACGAAAACAATAGTGACAAGGGAACCGAATTGGGTTTTTCCGAACCGGGTTTGATGGCATGCGAGTGGACCGAAGAGGTGTTGAACCGGTCTGGAAGTCACGATTCGTCGCTGAGCCACCAGTCTGAGGCGGCTAATGCGGTGGAGAGCGAGAGCATGGTGTCGGTGGAGACGGCGGAGACTTCGATCCTCTTCCGAGAAGAACCGGATTCGAACCCGAAACGCGTGCAACGAACCGATGATGTTGGTTTGGAGCTTACCCTGGGGTTGGAACCGGTTTCACGAGCGCAGCACGTGGTTCCGGTGAAGAAGAGAAGAATCGAGTTGAAAGATTTGAGCGGGTCGGGTGAGAGTGGGTCGTGCAAGATGGAGCTGGGGCTTGAATGCTCGGCTTGA 903 0.557 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVENVLKGAPITPITSEAAASGRGPPLKAYDIRHVSKDENSAASNETQQQRVKTRSRVKRPLATPKPKSTTNENNSDKGTELGFSEPGLMACEWTEEVLNRSGSHDSSLSHQSEAANAVESESMVSVETAETSILFREEPDSNPKRVQRTDDVGLELTLGLEPVSRAQHVVPVKKRRIELKDLSGSGESGSCKMELGLECSA* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01026 300 MobiDBLite consensus disorder prediction 134 183 - -
Lapu1g01026 300 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Lapu1g01026 300 MobiDBLite consensus disorder prediction 163 179 - -
Lapu1g01026 300 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Lapu1g01026 300 PIRSF AS2 1 299 IPR017414 -
Lapu1g01026 300 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01026 Lapu-Chr1 23527264 23530331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01026 1 296 AS2 family AT3G02550 57.718 1.58e-109 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu1g01026 LOB 2.3e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu1g01026 1 23527264 23530331 Lapu1g01026 1 23527264 23530331 ECH