Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g01024 ATGGGTCTTGACATCATCACCAACAAGGTTTCAGAGTCTGAACGTTGTGGCATTCCCCATTACCTGCTTGGCATCATAGATGACCCTGATAGTGACTTCACCATTGGTGACTTTTGCAAGCATGTCCTTGTTGCTCTTGATACCATCATTGAAAACGGACACCTACAAATTATCGTGGGAGGTTCCAACACTTACCTCGTATCCTTGCTTGAGGACCCTAACATTTCAGCATTTCGTTCCAACTATGATTGTTGTTTCATCTGGGTTGATGTGGCTTTACCAGTGCTGTTACCGTATCTGGACAAAAGGGTGGACGAAATGGTTGATGCAGGAGTTGTGGATGAGATTCGAGAAGCTTTTGTGGTTGGAGCAGATTGCACTCGTGGGATTAGAAGAGCCACTGGGGTTCCTGATCAGCTGGGAGAGTATTTCCTTGTCGAGAAGGAAAGAGACGATGAGGCTCAAAAGGAGAAGATGCTGCAACATGCTATTGTGAAAACCAAGGAGAACATTTTGTAA 519 0.4509 MGLDIITNKVSESERCGIPHYLLGIIDDPDSDFTIGDFCKHVLVALDTIIENGHLQIIVGGSNTYLVSLLEDPNISAFRSNYDCCFIWVDVALPVLLPYLDKRVDEMVDAGVVDEIREAFVVGADCTRGIRRATGVPDQLGEYFLVEKERDDEAQKEKMLQHAIVKTKENIL* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g01024 172 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 2 170 IPR039657 -
Lapu1g01024 172 Pfam IPP transferase 2 72 - -
Lapu1g01024 172 Pfam IPP transferase 79 167 - -
Lapu1g01024 172 Gene3D - 1 171 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g01024 Lapu-Chr1 23485621 23489738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g01024 2 85 C2H2 Transcription Factor Family AT2G27760 34.831 1.51e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g01024 K10760 - gmx:121173984 273.478