Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00973 ATGAGTATTTGGGTTTACAAATTCGTTATTTGGGTTTCATCTATTTTCTGGTTGATACGGGTGTCGTCGGGAGATGTTCTTGATGACAACATCCTGATAGACTGTGGATCCCCCAACAATACTCAGGTGGGGGCACGATTATTTCAAGCCGATAATTCCTCTGCCCTCTTACTTTCAACCTCAGAGCTTATTTTGGCTAAGGCAAACTCCAGTCCTATTCCGTCATCTTTTGATTCAGAACTATACCAGACGGCTCGGATCTTTAGGAGTGTTTCTCAATACACATTCCCCATAAAAAAACATGGAAGGCACTGGATTCGCTTGCATTTCTTCCCTTTCAATTTTGGAAATTACAATATGAGCACTGCAAAATTCTCTGTTTCTGCTCGTAGCATCACACTGCTCAATGATTTTCAAATATACAGTGGTTCATTGCTAAAAGAATTCTCTTTAAACATAACTGACAGCCAGCTCGTGCTAACCTTTATCCCTTCTTTTGGTTCATTTGCCTTTATCAATGCCATAGAAGTTTTATCCATCCCTGATCACGTTATTCCTGAGCGTGTTAGCATTGTGAGCCCTGATGTGGACGATAAAGATCTGTGGAAGAAGGCACTGGAAACTGCTGCTAGGGTGAATATGGGTAATCAAACTGTGTCTCCTCTTAATGATACTTTGTGGCGTCTATGGGTCTCGGACGACAGATACCTTATACACAATAATCTCGTGGATTTTGTATCCAATGTTGCAGCAGTTAATTTCACAGAAACAAACATTACACTAGATATTGCCCCGTCCAAGGTATACGGGACTGTGACTAGATTGAGAACGGGTTCAGATCCCAGAACAATTGCTAATGTGACATGGCTTTTTAATGTTGATCCCGGCTTTGATTATCTGGTTCGCTTTCATTTTTGTGACATTGTGAGTCTACCTCCAAACACTCTCTTCAACGTTTATATTAACTCTTGGCTTGTTTCTACAGTCGATCTTGGTAAACAAACATCAAATAAATTTGGTGCGCCATATTACATGGATGCCATCACTAGGACTAGTGGAAGCCGAAGGTTAAATGTTAGTGTTGGTACTTTCAGTATAAGTGAAGCATCTTCTCCGGAGGCCATTCTCAATGGGCTGGAGATCATGAAAGTGAGCAACTCTGAAGATGGTCTGGTTCTACATTCAGAGAGAAGTAGGAAGAAAAGAGTTGGTATCATAGTGGGTTCAGCGACAGGATCCATGGTTGTTTTTTGGGCTATGGTTATGGCTTTACTTATGCTTTGTAGAAGAAAAAGAAACAATCTCCACACTGGTCATTTAAAAGGTGACAATTTTCCTGTTAACGAAGTAGTAAATAACAACAACTATGTTGGTAAAGCGAATTTTCACAACCCAGAAATTGGGTATCGGACGCCTCTTACAGTAATTCAAGAGGCAACTAATAACTTCAGTGAAGATTTGATCATTGGTGCTGGTGGTTTCGGGACGGTTTACAGGGGAATTTTGAAAGATGAAACAATGGTAGCTATCAAAAGGTGCTCAAGCCAATCACAACAAGGTCTTGCTGAGTTTTGGACTGAGATTGAGATGTTATCACAGTTTCGTCATCGTCACTTAGTTTCATTGATTGGGTATTGTAACGAACAAAATGAGAGGATCATTATTTATGAGTACATGGCAAAAGGGAGCCTGAAGGACCATATGTTTGGATCAGATGCATATACACATTGCTTAAGTTGGAGGCAGAGGCTCGAGATTTGCATAGGAGCAGCCAGAGGTCTACATTATCTTCACACCGGCTCTGCCAAGGCAATAATTCACCGTGATGTCAAAGCGGCAAATATCCTGCTTGATGAAAATTTCATGGCCAAAGTTTCCGATTTTGGTCTTTCAAAGACTGGTCCAGAGATTGATAAGACACATGTCAGTACAGCAGTGAAAGGCAGCTTTGGGTATGTTGATCCAGAATACTTAATAATGCAACAGTTGACCGAAAAATCAGATGTTTACTCTTTTGGGGTGGTCATGTTTGAAGTCCTATGTGGGAGACCGGCAATTGATCCATCACTTACGAGGGACAAGGTGAATCTAGTGGAATGGATAATGAAATGGCAGGGGAGAAGCACAACATATGAAATTATTGTTGATCCTCGCCTTGCGGTTGCAGGTCAGATGAAGTCAAAGTCACTCCAGATATTCATAGAGACTGCCATAAAATGCTTGTCGGAACATGGAATCAACCGGCCTAGCATGGGAGACGTGTTGTGGCACTTGGAGTATGCTTTGCGACTAGAAGATGTTGATGACAGATCCAATCATGTTGATGACGTGGCTTCCCAAACGTATAGCTCATATAATGGATTATCTTCCAGAGAATGCAGCATGGGAAGTGTAGGAGATTTTTCTGGTGTTTCAATGAGCAAGGTGTTTGCCCAAATGGTTAGGCAGCAGCCTTGA 2457 0.4151 MSIWVYKFVIWVSSIFWLIRVSSGDVLDDNILIDCGSPNNTQVGARLFQADNSSALLLSTSELILAKANSSPIPSSFDSELYQTARIFRSVSQYTFPIKKHGRHWIRLHFFPFNFGNYNMSTAKFSVSARSITLLNDFQIYSGSLLKEFSLNITDSQLVLTFIPSFGSFAFINAIEVLSIPDHVIPERVSIVSPDVDDKDLWKKALETAARVNMGNQTVSPLNDTLWRLWVSDDRYLIHNNLVDFVSNVAAVNFTETNITLDIAPSKVYGTVTRLRTGSDPRTIANVTWLFNVDPGFDYLVRFHFCDIVSLPPNTLFNVYINSWLVSTVDLGKQTSNKFGAPYYMDAITRTSGSRRLNVSVGTFSISEASSPEAILNGLEIMKVSNSEDGLVLHSERSRKKRVGIIVGSATGSMVVFWAMVMALLMLCRRKRNNLHTGHLKGDNFPVNEVVNNNNYVGKANFHNPEIGYRTPLTVIQEATNNFSEDLIIGAGGFGTVYRGILKDETMVAIKRCSSQSQQGLAEFWTEIEMLSQFRHRHLVSLIGYCNEQNERIIIYEYMAKGSLKDHMFGSDAYTHCLSWRQRLEICIGAARGLHYLHTGSAKAIIHRDVKAANILLDENFMAKVSDFGLSKTGPEIDKTHVSTAVKGSFGYVDPEYLIMQQLTEKSDVYSFGVVMFEVLCGRPAIDPSLTRDKVNLVEWIMKWQGRSTTYEIIVDPRLAVAGQMKSKSLQIFIETAIKCLSEHGINRPSMGDVLWHLEYALRLEDVDDRSNHVDDVASQTYSSYNGLSSRECSMGSVGDFSGVSMSKVFAQMVRQQP* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00973 818 Gene3D Phosphorylase Kinase; domain 1 447 558 - -
Lapu1g00973 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Lapu1g00973 818 CDD STKc_IRAK 489 759 - -
Lapu1g00973 818 SUPERFAMILY Protein kinase-like (PK-like) 473 773 IPR011009 -
Lapu1g00973 818 ProSitePatterns Protein kinases ATP-binding region signature. 489 511 IPR017441 GO:0005524
Lapu1g00973 818 FunFam Receptor-like protein kinase FERONIA 205 386 - -
Lapu1g00973 818 Gene3D Transferase(Phosphotransferase) domain 1 559 783 - -
Lapu1g00973 818 SMART serkin_6 483 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00973 818 PANTHER OS07G0166700 PROTEIN 470 765 IPR045272 GO:0004714|GO:0006468
Lapu1g00973 818 Gene3D - 205 386 - -
Lapu1g00973 818 Gene3D - 30 180 - -
Lapu1g00973 818 FunFam Putative receptor-like protein kinase 30 181 - -
Lapu1g00973 818 FunFam Receptor-like protein kinase FERONIA 559 780 - -
Lapu1g00973 818 ProSiteProfiles Protein kinase domain profile. 483 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00973 818 FunFam receptor-like protein kinase FERONIA 448 558 - -
Lapu1g00973 818 Pfam Protein tyrosine and serine/threonine kinase 488 683 IPR001245 GO:0004672|GO:0006468
Lapu1g00973 818 Pfam Malectin-like domain 33 384 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00973 Lapu-Chr1 22985463 22988747 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00973 1 817 Receptor kinase-like Gene Family AT3G46290 49.169 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lapu1g00973 Malectin_like 1.6e-30 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00973 - - lang:109328391 1125.92