Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00947 ATGGCAGACGACTCGCCCAAGAATAAAGTCAAGTTCCTCTGCAGCTACGCCGGCAAGGTCCTTCCACGACCCTCCGATGGCCTCCTCAGGTATGTCGGCGGCGAGACTCGGGTCGTTTCAGTGCCTCGCGACGTCACCTTCTCCGAGCTGATGAAGAAAGTGGGGAGCATGGTGGAGGGGGAGGTGGTGCTCAAGTACCAGCTGCTCCCCGAAGATCTGGACGCCTTGGTGTCGGTTAGGACGGAGGAAGATGTGAGGCACATGATCCAGGAGCACGATCGCCACCACACCGGATTGCTCCGTTCATTCCTCTTCCCCCCTTCCAAGACGCCTTTGCCTGCCTCTGAGCCCTATCTCTTGGAGCACTCTTACATCGACGCCATCAATGGGATCCTCCGAACAAGCCCTAGGACCGCCTGGGGCTCTGCCTGTTCTTCCCCAAAATCAACTTCACCCGATGCAGGGGATCTCTACTCCCCTCGCTTTCCCATTTCCAAGTCCAATGCCATGCAGAGAGTGCGAAGCTCTCCCAGCCTCACCAACATGGGTGGCTTGGATCACCAAGCTCATTATCAGCAGCAGCAGCAGCAGCATCCCCATCTCCTTTTTCACAACCATCCATCTTCCTCTTCGTCTAGACCGCCCCAAGATCCTCAAATGGGAAGGCTTGGAGGGAGGGGTGCCTCCTTTAACTATCACTACTCAAACACCAGACAACCCCACAGAGGAGCAGGCTACGGCTACCCTGATGACTCTGCAGCCTATGCGAATGCACATCTTCCCCTTTATGGTCTGTGCAGAAGTCCTAGAAGAAAATCTGTATGGGACTAG 831 0.5584 MADDSPKNKVKFLCSYAGKVLPRPSDGLLRYVGGETRVVSVPRDVTFSELMKKVGSMVEGEVVLKYQLLPEDLDALVSVRTEEDVRHMIQEHDRHHTGLLRSFLFPPSKTPLPASEPYLLEHSYIDAINGILRTSPRTAWGSACSSPKSTSPDAGDLYSPRFPISKSNAMQRVRSSPSLTNMGGLDHQAHYQQQQQQHPHLLFHNHPSSSSSRPPQDPQMGRLGGRGASFNYHYSNTRQPHRGAGYGYPDDSAAYANAHLPLYGLCRSPRRKSVWD* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00947 276 MobiDBLite consensus disorder prediction 164 184 - -
Lapu1g00947 276 SUPERFAMILY CAD & PB1 domains 25 111 - -
Lapu1g00947 276 SMART PB1_new 24 107 IPR000270 GO:0005515
Lapu1g00947 276 MobiDBLite consensus disorder prediction 202 217 - -
Lapu1g00947 276 MobiDBLite consensus disorder prediction 139 184 - -
Lapu1g00947 276 MobiDBLite consensus disorder prediction 202 230 - -
Lapu1g00947 276 MobiDBLite consensus disorder prediction 139 153 - -
Lapu1g00947 276 PANTHER OS05G0427100 PROTEIN-RELATED 4 227 - -
Lapu1g00947 276 Gene3D - 30 105 - -
Lapu1g00947 276 Pfam PB1 domain 29 106 IPR000270 GO:0005515
Lapu1g00947 276 CDD PB1_UP2 13 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00947 Lapu-Chr1 22803560 22804482 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00947 3 143 MAP Kinase Kinase Kinase AT3G46920 44.156 1.34e-33 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00947 - - vun:114186951 395.586