Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00932 ATGGAACTATCAGATATGCAAAACAACAAGCAGAGCAGCAGCAACACGAAAACAAACACGGGGGGAGGAGGAGGAGGAGGTGGAGGAGGAGGAGGAGGAAGTGGCACAACTCATGGTCATCCACATCCACATCCCCATCCCCACCATCACTCCTCTTCTTCCCATCTTGTGGTCCCTTTCGAGCCCAGGCCTAACCCTCCATCCCCCTTCATCTCTTCCTCCAACTCTTCTTCTTCCAATTCTTCATCCTCTTCCTCCTCCGCCTCCGCCTCTCCCCACATCATCGACGCCTCCCTAGCCATCGCCACCAGATCTGATGATTCCGCCAAGAACACCCAACAACTCTCCGCCGCCGCCGCCGCCTCCCCCGCCACCAACCCTCCCAAGCGATCCACCAAGGACAGGCACACCAAAGTCGACGGCCGCGGCCGCAGAATTCGAATGCCAGCCACCTGCGCCGCTAGGGTTTTCCAATTGACCAGAGAATTGGGCCACAAGTCCGACGGCGAGACCATCGAGTGGCTCCTCCAGCAGGCCGAGCCCGCCATCATCGCCGCCACCGGAACCGGCACCATCCCCGCTAATTTCTCCACCCTCAACGTCTCCCTCCGCAGCAGCGGCTCCACGCTGTCGGCGCCGCCGTCCAAGTCCGCCCCGCACACCTTTCACGGCGCGCTCGCACTCGCTCACCACCCTTACGAGGAAGCCTTTCAGCACACCGCTTTACTTGGCTTCCACCCTCACGCTCACGCTCACCAGCAGCACCAACAGCAACAACTTCTTTCCGCCGATCAAATCGCCGAAGCGCTTCCCAGCGGCGGCGGTGACTCCGGCGACAGCTATCTCAGGAAACGCTACCGAGAAGATCTGTTCAAAGACGATAACATTAACACCCAATCCCAGAACGAGAGTGGTGACGGTTCTTCGCCCAAAACTCCGAACCTACAGCTACCGAAGCAGCACCACCAGCAGCAAACCGAAGCTGGTTCTGGGCTTCTCAGGCCCACGAATTTGCTACCCGCGACAGCGATGTGGGCCGTGGCGCCCGCTCCCGCGAGTGGGCCTCCAGGCAGCACAATTTGGATGCTTCCGGTAACCGCGGCTTCTTCTGCTTCTGCTGCAGCTTCAGCTTCTGCTTCTTCTGGTGGTGGGGGTGGGGGTGGTGGTGGTGGATCCTCTGCGAGTTCGGACAGTCAGATGTGGCCTTTCCCTCAGAGTGGTTTCATGCCGAGGTTCAATCTTCCCAGTGCGCTTGAATTCCAAGGCGCACGTGCGGGTCCTTTGCAATTGGGGTCAATGCTAATGCCGCAGCAACCTTCTCAACATCTGGGTCTCGCCATGTCCGACTCCAACTTGGGCGTGTTGGCTGCCCTTAATGCTTACACTAGAGCTGGTTTCAATATTAATTCTGACAACCATCATCCTCATCACCATCATCATCACCATCATCATCCCTTGGAGCATCAACATCAACATCAACATCAACCTCAACCTAGTGAGAGTGGAGAAGATGCTCCTAACAGCTCCCAATGA 1533 0.5766 MELSDMQNNKQSSSNTKTNTGGGGGGGGGGGGGSGTTHGHPHPHPHPHHHSSSSHLVVPFEPRPNPPSPFISSSNSSSSNSSSSSSSASASPHIIDASLAIATRSDDSAKNTQQLSAAAAASPATNPPKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFSTLNVSLRSSGSTLSAPPSKSAPHTFHGALALAHHPYEEAFQHTALLGFHPHAHAHQQHQQQQLLSADQIAEALPSGGGDSGDSYLRKRYREDLFKDDNINTQSQNESGDGSSPKTPNLQLPKQHHQQQTEAGSGLLRPTNLLPATAMWAVAPAPASGPPGSTIWMLPVTAASSASAAASASASSGGGGGGGGGGSSASSDSQMWPFPQSGFMPRFNLPSALEFQGARAGPLQLGSMLMPQQPSQHLGLAMSDSNLGVLAALNAYTRAGFNINSDNHHPHHHHHHHHHPLEHQHQHQHQPQPSESGEDAPNSSQ* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00932 510 ProSiteProfiles TCP domain profile. 132 186 IPR017887 -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 295 329 - -
Lapu1g00932 510 Pfam TCP family transcription factor 131 259 IPR017887 -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 1 22 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 1 91 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 70 91 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 290 329 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 105 128 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 467 510 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 473 489 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 105 144 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 495 510 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 376 408 - -
Lapu1g00932 510 MobiDBLite consensus disorder prediction 129 144 - -
Lapu1g00932 510 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 75 455 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00932 Lapu-Chr1 22696964 22701683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00932 129 451 TCP Transcription Factor Family AT1G35560 48.308 1.54e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lapu1g00932 TCP 1.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00932 - - vra:106776202 657.521