Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00929 ATGGCTGCCATTTTCATATTCTTCTCCCTCATCGCTTCCACTTATGGATTCGATTCCTTGGATCCTTTTGGCAACATCACCATCACATGGGATTATTTGTCCGACAACGGGAATTCACTCGACGTGAGGGTATCAATGTACAACTTCCAACTATTTCGTCACGTGGAGGAACCTGGTTGGAATTTGGGTTGGGCATGGAAAGGTGATGAGGTGATTTGGGCAATGTTGGGAGCAGAGGCAAAGGAGCAAGGGAATTGCACAAGATTTAGAGGACAACAGAAACCACATTGTTGTGAGAAGAAGCCAGTTATCATTGATCTAATGCCTGGAACCCCCTACAATATGCAGACTGCAAATTGTTGTAAAGGTGGGGTCCTAACATCCTTAAAACAAGATGATACCAAACGTGGTGCCGCCTTCCAGATGACTTATATAAAAGCATCAGTCTCCGATTCAGGTGGCAGTTTTAGCATGCCCGAAAATTTCACCCTTGGAATTCCTGGCTATAGTTGTGGGACACCATTTCAAGTCCCGCCAACCAAGTTTACCAGAGATGGACATAGATGGCAACAAGTCTTGGAGACATGGAATGTGACTTGTATTTACTCCCAGTTTCTAGCATCACCTGCTCCAAAATGTTGTGTCTCTTTGTCTGCATTCTATAACAATACCATTGTTCCTTGTCCCACATGCAGTTGTAATTGCCAAGGACTACCAGGAGCGACTTGTTTGGATTCTGATAAGACTTCAATGTTGCAACTACCACAAACAAATCGCGGAGAACCATCAGCACCAGTAATCAGGTGTTCACATCACATGTGCCCCATTCGTATTCACTGGCATGTGAAACAAAGTTATAAAGAACATTGGCGGGTCAAGATCACGATTACAAATATGAACTTTGTCAAAAACTATTCCCAGTGGAATTTGGTGGTGTTACACCCTAACCTGCGAAGTGTAACCCGAGTCTTCAGTTTCAACTACCAACCCCTACCAGTTTATGAAAATTTCAGTGACATAGGGATGTTTTGGGGGCTAGAGTACTACAATGACATGTTGCTGACACATGGAAAAAATGGCAATGTGCAAACAGAGGTGTTACTACAGAAAGATGGGCGAGAGTTCAGCTTTAAAGAAGGTTGGACTTTTCCTAGAAAAGTTTCATTCAATGGCGATGAATGTGTGATGCCATCTCCTGATGCATATCCAAGACTCCCCAATGCAGCTCATATTGCCACAACAACTCTTTCCACAGTTTTCCTTTTATTATTACTGCTTTTAGTATTGTTATAG 1293 0.4285 MAAIFIFFSLIASTYGFDSLDPFGNITITWDYLSDNGNSLDVRVSMYNFQLFRHVEEPGWNLGWAWKGDEVIWAMLGAEAKEQGNCTRFRGQQKPHCCEKKPVIIDLMPGTPYNMQTANCCKGGVLTSLKQDDTKRGAAFQMTYIKASVSDSGGSFSMPENFTLGIPGYSCGTPFQVPPTKFTRDGHRWQQVLETWNVTCIYSQFLASPAPKCCVSLSAFYNNTIVPCPTCSCNCQGLPGATCLDSDKTSMLQLPQTNRGEPSAPVIRCSHHMCPIRIHWHVKQSYKEHWRVKITITNMNFVKNYSQWNLVVLHPNLRSVTRVFSFNYQPLPVYENFSDIGMFWGLEYYNDMLLTHGKNGNVQTEVLLQKDGREFSFKEGWTFPRKVSFNGDECVMPSPDAYPRLPNAAHIATTTLSTVFLLLLLLLVLL* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00929 430 PANTHER PROTEIN COBRA 4 423 IPR006918 GO:0010215|GO:0016020
Lapu1g00929 430 PIRSF COBRA 1 430 IPR006918 GO:0010215|GO:0016020
Lapu1g00929 430 Pfam COBRA-like protein 42 203 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00929 Lapu-Chr1 22676349 22679738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00929 16 430 COBRA Gene Family AT3G29810 51.667 8.62e-163 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00929 - - lang:109329241 699.123