Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00921 ATGGAGAAATACGAGCTCGTCAAGGATATAGGATCTGGGAATTTTGGGGTGGCAAGGCTCATGCGTCACAAAGACACCAAGGAGCTTGTTGCCATGAAATACATTGAAAGGGGTCAAAAGATTGATGAGAATGTTGCGAGGGAAATCATAAACCATAGAAGTCTTCGTCACCATAATATTATTCGGTTCAAGGAGGTGGTTTTGACTCCCACACATCTAGGTATTGTTATGGAGTATGCAGCTGGTGGAGAGCTCTTCGAGAGGATTTGCAGTGCTGGAAGATTCAGTGAAGACGAGGCTCGATATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGTCATTCCATGCAAATCTGTCATCGAGACTTGAAGCTTGAGAACACCTTACTGGATGGCAGCCCCGCCCCACGGCTCAAAATTTGTGATTTTGGTTATTCTAAGTCATCTCTGCTTCATTCAAGGCCTAAGTCAACTGTGGGAACCCCAGCCTACATTGCGCCTGAGGTTCTTTCACGCAGAGAATATGATGGAAAGTTAGCTGATGTATGGTCCTGTGGAGTGACTCTTTATGTGATGTTGGTGGGAGCCTACCCATTTGAAGACCAAGAGGATCCCAAAAATTTTAGAAAAACCATCAATCGAATTATGGCTGTTCAATACAAGATCCCAGACTATGTTCACATATCTCAAGACTGCCGACATCTGCTATCTCGCATTTTTGTGGCAAATGCAGCTAGGAGAATCACTATTAAGGAAATAAAGTCCCACCCATGGTTTTTAAAGAATTTGCCTAGAGAATTAACAGAAGTAGCTCAAGCTGCCTACTACAGAAAAGAAAATCCAACCTTTTCTCTTCAGAGTATAGAAGACATTATGAATATTGTTGAGGAGGCCAAGGTTCCACCTCTGGCATCCAGGTCAATTGGAGGGTTTGGTTGGGGAGAAGAAGATGAGGATGAAACAAAAGAAGCAGAGGCTGAGGCTGAGGCTGAGGCTGAAGATGAGTACGAAAAGAGAGTCAAAGAAGCACAGGCAAGCGGGGAATTTCATGTTAGTTAA 1062 0.4388 MEKYELVKDIGSGNFGVARLMRHKDTKELVAMKYIERGQKIDENVAREIINHRSLRHHNIIRFKEVVLTPTHLGIVMEYAAGGELFERICSAGRFSEDEARYFFQQLISGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLSRREYDGKLADVWSCGVTLYVMLVGAYPFEDQEDPKNFRKTINRIMAVQYKIPDYVHISQDCRHLLSRIFVANAARRITIKEIKSHPWFLKNLPRELTEVAQAAYYRKENPTFSLQSIEDIMNIVEEAKVPPLASRSIGGFGWGEEDEDETKEAEAEAEAEAEDEYEKRVKEAQASGEFHVS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00921 353 MobiDBLite consensus disorder prediction 310 353 - -
Lapu1g00921 353 Coils Coil 327 347 - -
Lapu1g00921 353 FunFam Serine/threonine-protein kinase SRK2E 1 79 - -
Lapu1g00921 353 FunFam Serine/threonine-protein kinase SRK2A 80 268 - -
Lapu1g00921 353 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Lapu1g00921 353 SUPERFAMILY Protein kinase-like (PK-like) 1 299 IPR011009 -
Lapu1g00921 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 119 131 IPR008271 GO:0004672|GO:0006468
Lapu1g00921 353 Gene3D Phosphorylase Kinase; domain 1 1 79 - -
Lapu1g00921 353 MobiDBLite consensus disorder prediction 315 333 - -
Lapu1g00921 353 CDD STKc_SnRK2 3 259 - -
Lapu1g00921 353 SMART serkin_6 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00921 353 Pfam Protein kinase domain 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00921 353 Gene3D Transferase(Phosphotransferase) domain 1 80 268 - -
Lapu1g00921 353 ProSiteProfiles Protein kinase domain profile. 4 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00921 353 PANTHER SERINE/THREONINE KINASE 2 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00921 Lapu-Chr1 22630679 22634054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00921 3 263 CBL-interacting serine-threonine protein kinases AT4G24400 42.593 3.53e-65 210
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lapu1g00921 Pkinase 7.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00921 K14498 - gmx:100812259 653.284