Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00885 ATGGCTGATGCCACCACCTATGTGGTCGGCGGTGCAAGTGGGTGGAACTTCAACTCCAACAGCTGGCCTAATGGAAAGAAATTCAAGGCTGGTGATGTACTAGTGTTCAACTACAGTCCTGCTGAGCACGATGTTATGATAGTATTTCGGGATGGATACAACTCATGCGATCCTTCAAGAGCAACGAAAACCTATAACTCAGGCCATGATCAGATCACACTCGCCCAAGGAACAACCTACTTCATCTGCTCTTTTCCTGGTCACTGCCAGGGTGGCATGAAAATGGCAGTTACTGCTGCATGA 303 0.4818 MADATTYVVGGASGWNFNSNSWPNGKKFKAGDVLVFNYSPAEHDVMIVFRDGYNSCDPSRATKTYNSGHDQITLAQGTTYFICSFPGHCQGGMKMAVTAA* 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00885 100 ProSitePatterns Type-1 copper (blue) proteins signature. 77 93 IPR028871 -
Lapu1g00885 100 Gene3D - 3 100 IPR008972 -
Lapu1g00885 100 PANTHER BLUE COPPER PROTEIN 5 98 IPR039391 GO:0009055
Lapu1g00885 100 SUPERFAMILY Cupredoxins 6 99 IPR008972 -
Lapu1g00885 100 Pfam Plastocyanin-like domain 15 93 IPR003245 GO:0009055
Lapu1g00885 100 FunFam basic blue protein-like 5 99 - -
Lapu1g00885 100 ProSiteProfiles Phytocyanin domain profile. 5 100 IPR003245 GO:0009055
Lapu1g00885 100 CDD Plantacyanin 5 99 IPR041844 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00885 Lapu-Chr1 22345821 22346196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00885 5 99 Phytocyanin Superfamily AT1G17800 40.816 5.42e-21 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00885 - - mus:103987231 145.206