Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00884 ATGGGTGAGGGAAGAGGCATCAGAGCAATAGTTGTATTGTTCAGTGCGTTGGTGCTGTGCTCTGAGATGGCTCATGCAAGCACCTATGTGGTTGGAGGTCGAAGTGGATGGACTCTTAACATGGCTGCTTGGAGTGGAAAGGTTTACAAGGCTGGTGATACATTATTATTCAACTACGATGCGACGGAGCACAACGTGGTGGTAGTGGACGAGGGGGAATACAATTCATGCACTGCTCCACCAGGATCAAAAACGTATCAGACAGGACATGATTACATCCAGCTACCCAAAGGTCCCAGCTACTTCATTTCCTCTTTTCCTGGTCAATGTCAGGCTGGGATGAAATTATCAGTGAGTGCAGTATGA 366 0.4754 MGEGRGIRAIVVLFSALVLCSEMAHASTYVVGGRSGWTLNMAAWSGKVYKAGDTLLFNYDATEHNVVVVDEGEYNSCTAPPGSKTYQTGHDYIQLPKGPSYFISSFPGQCQAGMKLSVSAV* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00884 121 CDD Plantacyanin 28 120 IPR041844 -
Lapu1g00884 121 Gene3D - 27 120 IPR008972 -
Lapu1g00884 121 Pfam Plastocyanin-like domain 41 114 IPR003245 GO:0009055
Lapu1g00884 121 SUPERFAMILY Cupredoxins 28 119 IPR008972 -
Lapu1g00884 121 PANTHER BLUE COPPER PROTEIN 25 118 IPR039391 GO:0009055
Lapu1g00884 121 FunFam basic blue protein-like 27 120 - -
Lapu1g00884 121 ProSiteProfiles Phytocyanin domain profile. 27 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00884 Lapu-Chr1 22328197 22328674 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00884 9 121 Phytocyanin Superfamily AT1G17800 38.333 2.68e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00884 - - jre:109007045 143.665