Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00883 ATGGTAGTGTTGTGCATGTTGGGGATTTTCTCTCAGATGGCTCATGCAAGGACGTATGTGGTTGGAGATCACTGTGGTTGGACCTTCAACGTCTCTGATTGGCCTAATGGAAAGAATTTTAAGGCTGGTGACATCTTAGTATTCAACTATAATCCAAAATATCACAACGTGGTGCTAGTGGACGACTTTGGATACAATTCATGCGTTCCTCCAGACGGATCAAGAACGTATCAGTCAGGACATGATAGGATCCAACTTTTCAAGGGAAACAGCTTCTTCATCAGCACTTTTTCTGGTGACTGCAAGGCTAACACCAAAATTGCAGTTACGGTTTAG 336 0.4315 MVVLCMLGIFSQMAHARTYVVGDHCGWTFNVSDWPNGKNFKAGDILVFNYNPKYHNVVLVDDFGYNSCVPPDGSRTYQSGHDRIQLFKGNSFFISTFSGDCKANTKIAVTV* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00883 111 Gene3D - 17 111 IPR008972 -
Lapu1g00883 111 PANTHER BLUE COPPER PROTEIN 15 111 IPR039391 GO:0009055
Lapu1g00883 111 Pfam Plastocyanin-like domain 27 103 IPR003245 GO:0009055
Lapu1g00883 111 SUPERFAMILY Cupredoxins 18 111 IPR008972 -
Lapu1g00883 111 CDD Plantacyanin 17 111 IPR041844 -
Lapu1g00883 111 ProSiteProfiles Phytocyanin domain profile. 17 111 IPR003245 GO:0009055
Lapu1g00883 111 FunFam basic blue protein-like 17 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00883 Lapu-Chr1 22326273 22326736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00883 1 109 Phytocyanin Superfamily AT1G17800 38.261 2.45e-19 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00883 - - itr:116030552 145.591