Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00882 ATGGTAGTGTTGTGCACGTTGGGGATTTTGTCTGAGATGGCTCATGCAACCACGTATGTGGTCGGAGGTCACATCGGTGGTTGGGCCTTCAACATGACTGGTTGGCCCAGTGGGAAGCATTTTAAGGCTGGTGACACATTAGTATTCAACTATAATCCAACGTATCACAACGTGGTGATAGTGAACAAGGGTGGATACGACTCATGCGTAGCTCCAGCAGGATCAAAAACGTATAAGTCAGGACATGATAGCATCCAAATTGGGCGAGGAACCACCTACTTCATCTGCACCTTCTATGGTCACTGCGAGGCTAAGATGAAAATTGCTGTTACTGCTGCATGA 342 0.4737 MVVLCTLGILSEMAHATTYVVGGHIGGWAFNMTGWPSGKHFKAGDTLVFNYNPTYHNVVIVNKGGYDSCVAPAGSKTYKSGHDSIQIGRGTTYFICTFYGHCEAKMKIAVTAA* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00882 113 PANTHER BLUE COPPER PROTEIN 14 111 IPR039391 GO:0009055
Lapu1g00882 113 ProSiteProfiles Phytocyanin domain profile. 17 113 IPR003245 GO:0009055
Lapu1g00882 113 FunFam basic blue protein-like 17 112 - -
Lapu1g00882 113 SUPERFAMILY Cupredoxins 18 112 IPR008972 -
Lapu1g00882 113 CDD Plantacyanin 17 112 IPR041844 -
Lapu1g00882 113 Gene3D - 15 113 IPR008972 -
Lapu1g00882 113 Pfam Plastocyanin-like domain 31 105 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00882 Lapu-Chr1 22321863 22322341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00882 1 112 Phytocyanin Superfamily AT1G17800 39.316 3.23e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00882 - - mus:103987231 147.517