Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00877 ATGCCAAAATCGAAGAGAAATAGACAAGTTACGCTATCGAAGACGAAGAAGAAGGGAAGAGATCATAAAGAGGCGATAGTGAACGGAATAAAGGAGGCGGCAGAAAAGTACGCGTGTGTATTCGTGTTCTCGTTCGAGAACATGAGGAATCAGAAATTCAAGGAGTTCAGGGAACAGTTGAAATCGAGTAGCAGGTTCTTTCTCGGCTCTAACAAAGTAATGCAAGTCGCTTTAGGTCGCTCCGCCGCCGATGAGATTAGTCCCGGCCTTCACAAGGTTTCAAAGCTATTGCGGGGAGATGCTGGCATGGTTTTTACGAATTTGACGAAGGAAGAAGTTGAAAGGCTGTTCAAAGAATTTGAAGAATATGACTTTGCAAGAACCGGAAGCATTGCCACTGAAAAGGTGGATCTCAAAGAGGGTCCCTTGGAGCAGTTCACGCATGAAATGGAACCTTTTCTCCGGAAGCAAGGCATGCCTGTTCGGTTAAATAAAGGAGTTGTGGAGCTTGTTTCCGATTTTGTTGTCTGTGAGGAAGGGAAGCCCCTGTCACCTGAAGCTGCTCGTATACTGCGTTTAATGGGAATCAAGATGGCTACGTTTCGACTCCACCTAATTTGCAGGTGGAGTCCCGACGAGTTTGAACTTTACATCGATGGACCGGATGAATCAGATGTTGAATAG 684 0.4576 MPKSKRNRQVTLSKTKKKGRDHKEAIVNGIKEAAEKYACVFVFSFENMRNQKFKEFREQLKSSSRFFLGSNKVMQVALGRSAADEISPGLHKVSKLLRGDAGMVFTNLTKEEVERLFKEFEEYDFARTGSIATEKVDLKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKPLSPEAARILRLMGIKMATFRLHLICRWSPDEFELYIDGPDESDVE* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00877 227 Gene3D - 30 211 IPR043141 -
Lapu1g00877 227 Pfam Ribosomal protein L10 19 120 IPR001790 -
Lapu1g00877 227 PANTHER MRNA TURNOVER PROTEIN 4 MRTO4 1 220 - -
Lapu1g00877 227 SUPERFAMILY Ribosomal protein L10-like 20 144 IPR043141 -
Lapu1g00877 227 MobiDBLite consensus disorder prediction 1 22 - -
Lapu1g00877 227 MobiDBLite consensus disorder prediction 1 16 - -
Lapu1g00877 227 FunFam Ribosome assembly factor mrt4 29 132 - -
Lapu1g00877 227 Gene3D - 125 198 IPR043164 -
Lapu1g00877 227 CDD Ribosomal_P0_like 21 184 IPR033867 GO:0000027
Lapu1g00877 227 FunFam Ribosome assembly factor mrt4 125 198 - -
Lapu1g00877 227 Pfam Insertion domain in 60S ribosomal protein L10P 126 196 IPR040637 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00877 35 203 Cytoplasmic Ribosomal Protein Gene Family AT3G11250 21.302 1.32e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00877 K14815 - gmx:100500064 427.172