Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00874 ATGGACTCTCAAGTTTCTGCATACACAAGGCAAATTTTAAGTGGTTTGAAGTATCTTCATGATCGAAATGTGGTTCACAGGGACATCAAGTGTGCCAATATACTTGTTGATGCAAACGGGTTTGTGAAGCTTGCCGATTTTGGATTGGCAAAGGTTACTAAGGTGAATGGTGTTAGATCAATTGGAGGCTCCCTGTACTGGATGGCCCCTGAGGTTGTTAACATGAGGAACAGTGGATATGGACTAGCAGCCGATATATGGAGCTTAGGATGTACAGTGTTAGAGATGTTGACTCGAAAACCTCCTTACTCTCATTTGGAAGAAGTACGAGTTATATTTCGAATTGGCAGTGGTCATCGTCCACCTGTTCCAATATCTTTGTCAACAGATGCCCGAAATTTCATTCTTAAATGCTTACAAGTTAACCCAAACAAACGGCCAACTGCTGCTCAACTATTGGACCATCCATTTGTAAATACTTTCTCCAAACCAGCAAAGTTTTAA 504 0.4127 MDSQVSAYTRQILSGLKYLHDRNVVHRDIKCANILVDANGFVKLADFGLAKVTKVNGVRSIGGSLYWMAPEVVNMRNSGYGLAADIWSLGCTVLEMLTRKPPYSHLEEVRVIFRIGSGHRPPVPISLSTDARNFILKCLQVNPNKRPTAAQLLDHPFVNTFSKPAKF* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00874 167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Lapu1g00874 167 SMART serkin_6 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00874 167 ProSiteProfiles Protein kinase domain profile. 1 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00874 167 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 2 160 - -
Lapu1g00874 167 Pfam Protein kinase domain 3 158 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00874 167 SUPERFAMILY Protein kinase-like (PK-like) 4 162 IPR011009 -
Lapu1g00874 167 Gene3D Transferase(Phosphotransferase) domain 1 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00874 Lapu-Chr1 22263703 22264977 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00874 2 158 MAP Kinase Kinase Kinase AT4G08500 70.253 1.33e-73 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu1g00874 Pkinase 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00874 - K13414 var:108347588 279.256