Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00867 ATGGCATCCTCCAAGGTGGTCGTCACCACGAATCCCGATGTGGCACCACAGACTTCGATTTCGAGCCAGGTATGGGACGAGGTGGTCGCCGCCACTGAGTCTCAGGACATGACAATCAGCCTCCACGATTTGTTGTTGACCTCCGTTGCCAGAAACGACGCCGTTCCTCCCTCTCACGGGGGAAGGGGAAAGAGAAAGGCCGTGCAGGAACCCATCGTCGATAGGGCCACTCTTCAGAAACAGAGAAGGATGATAAAAAACAGAGAATCTGCCGCTAGGTCCAGGGAACGCAAACAGGCTTATACAGTTGAGTTAGAGTCTTTGGTTACAATTCTCGAGGAAGAGAATGCTCGATTGTTAAAGGAAGAGGCTGAAAGGAGAAGGAAGAGGTTCAATGAGCTCATGAAGTGCCTTATTCCAGTTGAGGAGAAGAGTAAACCAAGACGAATGCTTCGGAGAGTGAATTCAGCTCTGTGGTGA 480 0.5062 MASSKVVVTTNPDVAPQTSISSQVWDEVVAATESQDMTISLHDLLLTSVARNDAVPPSHGGRGKRKAVQEPIVDRATLQKQRRMIKNRESAARSRERKQAYTVELESLVTILEEENARLLKEEAERRRKRFNELMKCLIPVEEKSKPRRMLRRVNSALW* 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00867 159 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 82 97 IPR004827 GO:0003700|GO:0006355
Lapu1g00867 159 Pfam bZIP transcription factor 77 133 IPR004827 GO:0003700|GO:0006355
Lapu1g00867 159 Coils Coil 102 134 - -
Lapu1g00867 159 CDD bZIP_plant_BZIP46 79 125 - -
Lapu1g00867 159 SMART brlzneu 75 137 IPR004827 GO:0003700|GO:0006355
Lapu1g00867 159 SUPERFAMILY Leucine zipper domain 79 128 IPR046347 GO:0003700|GO:0006355
Lapu1g00867 159 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 77 129 IPR004827 GO:0003700|GO:0006355
Lapu1g00867 159 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 54 157 IPR043452 GO:0003700|GO:0045893
Lapu1g00867 159 Gene3D - 78 132 - -
Lapu1g00867 159 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 78 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00867 Lapu-Chr1 22212040 22214356 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00867 60 159 bZIP Transcription Factor Family AT5G44080 58.824 6.65e-30 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu1g00867 bZIP_1 1.4e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00867 K14432 - gmx:100101878 174.096