Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00861 ATGGTAGAAACGAAGGGAGTGATGAATGCATTGCATGGGTTGAAACCAGTGTTGTTGATGGTGGTAGTGCAAATTGCATACACTGCTGTCAATGTGCTTTTCAAACTCGCCATAAACGATGGAATGAGTGTAAAAGTTGCTACAGCATATCGTCTCGCTTTTGGATCTGCTTTCACTGTTCCTCTCGCTCTCATTTCTGAAAGGAACAAAAGACCGAAGATGACTTGGAGGGTGCTTTTCATGGCATTTCTTTGTGGATTATTCGGGGGAAGTTTGTTTCAAAACCTTTTCTATGAGTCCTTGGCTTTAACATCAGCAACCTTTGCCTCCGCTCTCTACAATCTCATTCCAGCTATCACCTTTGTATTGGCTATCTCCTGCGGTTTCGAAAAGTTGAATTTGAGGGCAGCCGCAGGAAGGGCCAAGGTGTTGGGAACTATAATTGGAATTGGTGGGGCAATGTTGTTGACTTTTATCAAAGGTCCACAAATTAATATCTGGCCCTTCCACATCAACCTTATGCATCCACCTCAGCACCAAGATAGCCACGTGGCACAGTTAAATTCTGACTCTGGCAATAAATTGTTGGGGGCTCTTTGTTCCATAGCAAGCTGCTTCTCTTTTTCCCTCTGGCTCACCATTCAGGCTAAGATGAGCAAAGAATACCCTTGTCACTATTCAAGCACGGCTCTGATGTCTACAGCAGGAGCAATACAAGCCACTGCTTTTGGTTTCTGTTTTGAGAGGGATTTGAGCCAATGGAAGTTGGGTTGGAATATTAGGCTACTTGCTGTGGCTTATTCGGGAATCGTGGCCTCTGGAATAGTAGTTATTATCACTGCATGGTGCATACAAATGAGAGGGCCTCTGTTTGCGTCTGTTTTCAACCCCCTAATGCTTGTGCTTGTGGCTATTGCTGGTTCTTTGATGTTGAATGAGAACTTGTATGTAGGAAGCGTGGTTGGAGCAGTGCTTATTGTGTGTGGGTTGTATATGGTTCTGTGGGGTAAAAGTAAAGAGATGAAAAACATCACTCAGTTAGTGCCATCAGAGACCATCCGAGAAGCTGAAGCCATAGAAGTTGTTGTCATGTCCACACCAATGGATCATGGTAAATGTGACCACAACAACCGAAGCGAAATCACTGCTACTACAACGAATTTAGGATTTGACCAAAAACAAGGAAGCTGA 1191 0.44 MVETKGVMNALHGLKPVLLMVVVQIAYTAVNVLFKLAINDGMSVKVATAYRLAFGSAFTVPLALISERNKRPKMTWRVLFMAFLCGLFGGSLFQNLFYESLALTSATFASALYNLIPAITFVLAISCGFEKLNLRAAAGRAKVLGTIIGIGGAMLLTFIKGPQINIWPFHINLMHPPQHQDSHVAQLNSDSGNKLLGALCSIASCFSFSLWLTIQAKMSKEYPCHYSSTALMSTAGAIQATAFGFCFERDLSQWKLGWNIRLLAVAYSGIVASGIVVIITAWCIQMRGPLFASVFNPLMLVLVAIAGSLMLNENLYVGSVVGAVLIVCGLYMVLWGKSKEMKNITQLVPSETIREAEAIEVVVMSTPMDHGKCDHNNRSEITATTTNLGFDQKQGS* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00861 396 PANTHER WAT1-RELATED PROTEIN 15 346 IPR030184 GO:0016020|GO:0022857
Lapu1g00861 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 156 - -
Lapu1g00861 396 Pfam EamA-like transporter family 15 157 IPR000620 GO:0016020
Lapu1g00861 396 Pfam EamA-like transporter family 196 334 IPR000620 GO:0016020
Lapu1g00861 396 SUPERFAMILY Multidrug resistance efflux transporter EmrE 253 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00861 Lapu-Chr1 22157859 22159800 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00861 14 379 Nodulin-like Gene Family AT1G25270 40.984 1.05e-94 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00861 - - gmx:100798755 681.019