Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00860 ATGAGAAATATAGGGAAAGTAGTGCATGGGTTGAAACCAGCCCTGCTGATGTTGATGGTGCAGATTGCATTTGCTTCAGTGAACGTGCTCTACAAACTTGCCATAAACGATGGAATGAGTGTGAGAATAATTACTGCCTACCGTCTCATTTTCGCAGCAGCTTCTACAGTTCCTCTTGCTCTTATTTTTGAAAGGAAAAGTATACCAACGCTGACTTGGAGGGTGATTTTTAAGTCATTTTTCTGTGGCCTATTCGGGGGAAGTCTATTCCAAAACCTTTATTTCGAGTCCTTGAAATTGATTTCAGCAACATTTGCTTCTGCTGTTTATAATCTCATTCCTGCCGTCACTTTTATCTTGGCCGTCACTTGCGGTTACGAAAAGTTAAATTTCCAAAGGGCAGCTGGTAAGGCTAAGGTGTTGGGAACGATAACAGGAGTTGGCGGGGCAATGATGCTGACCTTTCTCAAAGGTGTAGAAATCAACATTTGGACCTCCCACATTAACCTTTTGCATAAAAAGGGTACCACGGGAACACTAAATGGCGACTCTGGAAGTAAATTGCTAGGAGTTTTTTGTGGTCTTGGAAGCTGCTTCTGTTTTGCATTATGGCTCGTTATTCAGGGAATTGTGGCCTCTGGAGTAATGGTTATTGTGATTGCATGGTGTGTGAGGATGAGAGGTCCATTGTATGCATCTGTTTTCAATCCTCTTTTGCTAGTGCTTGTGGCCATTGCTGGTTCCCTGATGTTGGATGAGAACCTATACATAGGAAGTGTAATCGGAGCAGTGCTAATTGTGATGGGATTGTACATGGTGCTGTGGGGCAAGAGCAAAGAAATGAAAAGAGCGAGTCACGTAGAAACTACTCCAGAATTAGAAGAAATTGAGGTTGTTGTGACGTCTAGGGCAGCAGAGCACGATAAAGGTATGTACGAGAAGGACAAGTACACCTGTAGTGAGAGCAATGTTGTTGGGAAGGATGATGATAATGCATCAAAAAGCGAAAATAATGGGTAG 1020 0.4284 MRNIGKVVHGLKPALLMLMVQIAFASVNVLYKLAINDGMSVRIITAYRLIFAAASTVPLALIFERKSIPTLTWRVIFKSFFCGLFGGSLFQNLYFESLKLISATFASAVYNLIPAVTFILAVTCGYEKLNFQRAAGKAKVLGTITGVGGAMMLTFLKGVEINIWTSHINLLHKKGTTGTLNGDSGSKLLGVFCGLGSCFCFALWLVIQGIVASGVMVIVIAWCVRMRGPLYASVFNPLLLVLVAIAGSLMLDENLYIGSVIGAVLIVMGLYMVLWGKSKEMKRASHVETTPELEEIEVVVTSRAAEHDKGMYEKDKYTCSESNVVGKDDDNASKSENNG* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00860 339 PANTHER WAT1-RELATED PROTEIN 206 285 IPR030184 GO:0016020|GO:0022857
Lapu1g00860 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 201 279 - -
Lapu1g00860 339 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 142 - -
Lapu1g00860 339 Pfam EamA-like transporter family 12 152 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00860 Lapu-Chr1 22142237 22144293 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00860 11 298 Nodulin-like Gene Family AT1G25270 34.493 1.40e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00860 - - pvu:PHAVU_006G210200g 583.563