Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00859 ATGGAGAAGTGGAACGTAGTGCATGCGTTAAAGCCAGTTCTGCTAATGGTGATTGTGCAGGTTGCAAATGCCTGGGTCAATGTTCTCTACAAGCTTGCCCTTAACGATGGCATGAACTTGAGTGTCATTGTTGCTTACCGCTATGTTTTTGCAACTGCTTTCATTGCTCCCCTTGCTCTTCTTATTGAAAGGAAGACGAGGAAGAAGATGACTTGGACGATATTGTTTCAGGCATTTGTATGTGGCTTAATTGGCGGAGCATTGCCTCAAAACTTAAACATGGCAGCAATCGCTTTAACTTCAGTAACCTTCACAACAGCCATAACCAATCTCGTTCCAGCCCTCACCTTTATCATTTCCCTTTCCTTTGGATTGGAGAGATTGAATTTAAGAACAGCAGGAGGGAAGGCGAAGATAATTGGAACTATAACTGGAATTAGTGGAGCAATGATTCTGACTTTCATTAAAGGTCCAGAAATTGAGATATTGTCGTTCCATATAAACCTTTTTAACCACCCAAACACCAACGTGGTACATCCACACGCTACTTCTGGCGTCATGACCGTATTCGGTGCTCTCGCGTCTGTCGCAAGCAACGTCTCTTATGCACTCTGGCTTATCATTCAGACAAAAATGAGCGAAAGATACCCTTGTCCTTATTCAAGCACAGCGTTGATGTCTCTAATGGGGGCACTGTTATCCATTTCTTATGCATTTTGTGTTGAAAGGGATTTGAGTCAGTGGAGATTGGGTTGGAATATCAGACTGTTGACTGTAGCTTATGCGGGTATAGTGGTTTCTGGAGTGATGGTGGCTGTGATTTCGTGGTGCGTTCGCACGAGAGGTCCATTGTTTGTCTCCATTTTTAGCCCTCTCATGCTTGTGGTTGTGGCCTTTGCTGGATCCACTATTTTGGATGAGAAGCTATACCTTGGAAGCATAATTGGATCACTGATGATTATTTGCGGATTATACGTGGTTCTATGGGGTAAAAGCAAAGAGATGAGGAAGAATCAATCTGTTCCATCAGAAAGCATCCATAAATTTGACACAGTTGAAATAATGGTCAAACCTGGAATAGAAGATAAGAGCAATAATAGCCTCGTGAATGCTGCAAATGTGGTTGGCGATAAAGAAGATTCATGGGAAAATGTAGGTGATAACAACCACTGGTGCAAGGCGAGAGAAGAAGTAATATCTCAGAAGGCCTCGCGTACCTAA 1221 0.4292 MEKWNVVHALKPVLLMVIVQVANAWVNVLYKLALNDGMNLSVIVAYRYVFATAFIAPLALLIERKTRKKMTWTILFQAFVCGLIGGALPQNLNMAAIALTSVTFTTAITNLVPALTFIISLSFGLERLNLRTAGGKAKIIGTITGISGAMILTFIKGPEIEILSFHINLFNHPNTNVVHPHATSGVMTVFGALASVASNVSYALWLIIQTKMSERYPCPYSSTALMSLMGALLSISYAFCVERDLSQWRLGWNIRLLTVAYAGIVVSGVMVAVISWCVRTRGPLFVSIFSPLMLVVVAFAGSTILDEKLYLGSIIGSLMIICGLYVVLWGKSKEMRKNQSVPSESIHKFDTVEIMVKPGIEDKSNNSLVNAANVVGDKEDSWENVGDNNHWCKAREEVISQKASRT* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00859 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 144 - -
Lapu1g00859 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 248 333 - -
Lapu1g00859 406 Pfam EamA-like transporter family 11 151 IPR000620 GO:0016020
Lapu1g00859 406 Pfam EamA-like transporter family 190 328 IPR000620 GO:0016020
Lapu1g00859 406 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00859 Lapu-Chr1 22130871 22135100 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00859 2 337 Nodulin-like Gene Family AT1G68170 45.238 8.15e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00859 - - gmx:100788378 671.389