Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00858 TGGGGGTCACTACTGTCCATTGTGTTTGCACTTTGCTTTAAGAGGGACTGGAGTGAGTGGAGGTTGGGTTGGAATATTAGGCTTTGGACTGCAGCATATTCGGGCATCGTGGTTTCTGGGATCATGGTGGTTGTGATTTCATGGTGCATCCGCATGAGAGGTCCACTGTTTGCCTCTGTTTTTAACCCTCTGATGCTTGTGATAGTGGCCTTGGCGGGTTCTACCATGTTGAAAGAGACGCTACATCTAGGATGCATAATTGGAGCAGTGCTGATCGTGTGTGGCTTATACGTGGTTTTATGGGGTAAAAGTAAAGAGATGAAGAAGAAG 330 0.4697 WGSLLSIVFALCFKRDWSEWRLGWNIRLWTAAYSGIVVSGIMVVVISWCIRMRGPLFASVFNPLMLVIVALAGSTMLKETLHLGCIIGAVLIVCGLYVVLWGKSKEMKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00858 110 Pfam EamA-like transporter family 2 100 IPR000620 GO:0016020
Lapu1g00858 110 SUPERFAMILY Multidrug resistance efflux transporter EmrE 5 105 - -
Lapu1g00858 110 PANTHER WAT1-RELATED PROTEIN 2 107 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00858 Lapu-Chr1 22123019 22123858 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00858 2 109 Nodulin-like Gene Family AT1G68170 61.111 3.52e-41 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00858 - - vra:106774988 197.978