Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00847 ATGTCCACTACGAGAGTTCAAGTTTCGGCGTGTGCGCTTTCCGCTACCGTCAACCACCTTCGTCTCCGCTCAAACGCCGTCGTTTCCTTCACTAACCATTTCAGGAAGAAGTCCCTGAGGGTGGTGTCAATGTCTTCCGTTCCCCCTTCCCAACCCTTCGAAGTCGCCGTCAAAGCTTCCGTCACCATACCCAACAGGATCGGCGACTGTCCTTTTTGCCAAAGGGTACTACTATCACTGGAAGAAAAACATCTACCTTATGACCCCAAGTTGGTGGATTTAACCAACAAGCCAGAATGGTTCCTTAAAGTCAATCCTGATGGTAAAGTTCCTGTCATAAAGTTTGATGAGAAGTGGGTTCCGGATTCAGATGTTATTACTCAAACATTGGAAGAGAAGTATCCTAGCCCACCATTGTTGACCCCGCCCGAAAAGGCCACAGTGGGGTCAAAGATCTTTTCTACATTTATTGGATTTCTCAAGAGCAGGGATCCCAATGACGGAACAGAACAAGCATTACTAAGTGAACTGAGCTCTTTCAATGATTACATAAAGGAAAATGGCCCTTTCATCAACGGTAATGAGATATCTGCAGCTGACCTATCACTTGGACCAAAGCTATATCATTTGGAGATTGTTCTGGGGCATTATAAGAAATGGACAGTACCCGATTCTCTTACCTCTTTGAAGTCTTACACGAAGGCCATTTTCTCGAGGGAATCGTTCATTAAAACAAGTGCACTACGAGAAGATGTAATTGAAGGTTGGCGTCCCAAAGTAGAAGGCTAA 789 0.4512 MSTTRVQVSACALSATVNHLRLRSNAVVSFTNHFRKKSLRVVSMSSVPPSQPFEVAVKASVTIPNRIGDCPFCQRVLLSLEEKHLPYDPKLVDLTNKPEWFLKVNPDGKVPVIKFDEKWVPDSDVITQTLEEKYPSPPLLTPPEKATVGSKIFSTFIGFLKSRDPNDGTEQALLSELSSFNDYIKENGPFINGNEISAADLSLGPKLYHLEIVLGHYKKWTVPDSLTSLKSYTKAIFSRESFIKTSALREDVIEGWRPKVEG* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00847 262 SUPERFAMILY Thioredoxin-like 68 136 IPR036249 -
Lapu1g00847 262 FunFam Glutathione S-transferase DHAR3 chloroplastic 51 139 - -
Lapu1g00847 262 FunFam Glutathione S-transferase DHAR3, chloroplastic 140 262 - -
Lapu1g00847 262 Gene3D - 140 262 - -
Lapu1g00847 262 SFLD Glutathione Transferase (cytosolic) 69 236 IPR040079 -
Lapu1g00847 262 Pfam Glutathione S-transferase, N-terminal domain 69 138 IPR004045 -
Lapu1g00847 262 CDD GST_N_family 70 131 - -
Lapu1g00847 262 CDD GST_C_DHAR 139 259 - -
Lapu1g00847 262 Gene3D Glutaredoxin 52 139 - -
Lapu1g00847 262 SFLD Main (cytGST) 69 236 - -
Lapu1g00847 262 SUPERFAMILY GST C-terminal domain-like 133 259 IPR036282 -
Lapu1g00847 262 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 52 259 IPR044627 GO:0033355|GO:0045174|GO:0098869
Lapu1g00847 262 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 60 138 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00847 Lapu-Chr1 21968653 21974841 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00847 40 262 Glutathione S-transferase Gene Family AT5G16710 71.749 1.17e-123 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00847 K21888 - gmx:732557 474.937