Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00846 ATGAAGAGGGATTACCCAGAAACCTGCGCCGGAGGGGGTGTCAAGGGTGAGTGTTCCTCAGTCTCCAACGGGAAGGCCAAGATGTGGGAGGAAGAGCGCCAGCAGCAGGGAGGAGGGATGGATGAGTATCTGGCGCCGTTGGGCTACAAGATTCGTGTTTCCGACATGGCAGACGTGGCACGGAAGCTTGAGCAGTTGGACATGGTGATGGGCAGTGCCCAGGAAGAGGGAATTTCCCACCTTGCTTTCGACACCGTTCACTACGACCCCACGGATCTCCATTCATGGGTCCAAAGCATGTTAGCGGAACTCAACCCTGAAACCAGCAACATCAACAACACCATCCTCGATCCCTCCTCCTTCTTGATCGACAACCCCGTACACTCTTCCCCCATCCTCACCACCACCACCACCTCACGCGTTTTCAACGACGACTCCGAATATGACCTCAGAGCCATTCCCGGAATAGCCGCATACCCGCCTCAACACAACACAAACAACGCCACCACCATTAACGCCGCCGCCGCCGCCGCCGCCACCACCACCACCACCACCACCACAACAACTAGCAGTAACGCCAAAATCATTGAAGAAATGGAAGCAGGTAGTAACAAGCGCCTGAAGGCTTCCCCAATTGAACCCTCGGACTCCGCTTCGGAGTCCACGCGCCCGGTAGTCCTCGTTGACTCGCAGGAAGCTGGCGTGCGTCTGGTGCACACTCTCATGGCGTGCGCGGAGGCCGTCCACCAAGAGAATCTGAAGCTGGCGGACGCGCTGGTTAAGCACGTGGGCATACTGGCAGCGTCGCAAGCCGGCGCCATGAGGAAAGTGGCGTCGTACTTCGCCCAAGCTCTGGCGCATCGAATCTACGGTATCTTCCCGGAGGAAACCCTGGATTCCTCCTTCTCCGACCTTCTCCACATGCACTTCTACGAGTCCTGCCCCTATCTGAAGTTCGCACACTTCACCGCCAACCAGGCCATTCTCGAGGCCTTCGCCACCGCTGGGAGAGTCCACGTTATAGATTTCGGCCTCAAGCAAGGGATGCAGTGGCCCGCCCTCATGCAGGCCCTCGCGTTGCGCCCTGGCGGTCCCCCAACCTTCCGCTTAACCGGAATCGGGCCCCCGCAGCGTGACAACACTGACGCGCTGCAGCAGGTGGGCTGGAAGCTGGCCCAGTTGGCCCAAACCATCGGCGTCCAGTTCGAGTTCCGAGGATTCGTCTGCAGCAGCCTCGCAGATCTCGACCCGAACATGCTTGAGATCCGTCCCGGAGAAGCCGTCGCAGTCAACTCCGTCTTCGAGCTTCACCGCATGCTCGCCCGACCCGGATCCGTGGACAAGGTCATGGACACAGTTAAAAAACTCAACCCCAAAATCGTAACCATCGTGGAGCAAGAAGCGAACCACAATGGACCGGTTTTCTTGGACCGGTTCACTGAAGCCTTGCATTACTACTCGAGTCTGTTTGACTCGTTGGAGGGTTCTTCCTCCTCGACTGGGTTGGGTTCGCCGAGTCAGGATCTGTTGATGTCGGAGTTGTACCTTGGGAGACAGATATGCAACGTGGTGGCGTACGAAGGCTTGGAGCGCGTGGAGCGTCACGAGACTTTGAGCCAGTGGAGGGGCCGAATGGGCTCGGCCGGGTTCGACCCGGTTCATCTTGGGTCGAACGCGTTCAAGCAAGCTAGTATGTTGCTGGCGCTATTCGCAGGTGGTGACGGGTACAGAGTGGAGGAGAACAACGGGTGCCTCATGCTTGGCTGGCACACCAGGCCTCTCATCGCTACTTCCGCGTGGAAGCTTCCCTCGCCCGAGTCCTAG 1824 0.585 MKRDYPETCAGGGVKGECSSVSNGKAKMWEEERQQQGGGMDEYLAPLGYKIRVSDMADVARKLEQLDMVMGSAQEEGISHLAFDTVHYDPTDLHSWVQSMLAELNPETSNINNTILDPSSFLIDNPVHSSPILTTTTTSRVFNDDSEYDLRAIPGIAAYPPQHNTNNATTINAAAAAAATTTTTTTTTTSSNAKIIEEMEAGSNKRLKASPIEPSDSASESTRPVVLVDSQEAGVRLVHTLMACAEAVHQENLKLADALVKHVGILAASQAGAMRKVASYFAQALAHRIYGIFPEETLDSSFSDLLHMHFYESCPYLKFAHFTANQAILEAFATAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQRDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCSSLADLDPNMLEIRPGEAVAVNSVFELHRMLARPGSVDKVMDTVKKLNPKIVTIVEQEANHNGPVFLDRFTEALHYYSSLFDSLEGSSSSTGLGSPSQDLLMSELYLGRQICNVVAYEGLERVERHETLSQWRGRMGSAGFDPVHLGSNAFKQASMLLALFAGGDGYRVEENNGCLMLGWHTRPLIATSAWKLPSPES* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00846 607 FunFam DELLA protein GAI 39 104 - -
Lapu1g00846 607 Pfam GRAS domain family 237 601 IPR005202 -
Lapu1g00846 607 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 193 597 IPR005202 -
Lapu1g00846 607 SMART DELLA_2 41 114 - -
Lapu1g00846 607 ProSiteProfiles GRAS family profile. 228 601 IPR005202 -
Lapu1g00846 607 Gene3D - 39 104 IPR038088 -
Lapu1g00846 607 MobiDBLite consensus disorder prediction 200 224 - -
Lapu1g00846 607 Pfam Transcriptional regulator DELLA protein N terminal 41 108 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00846 Lapu-Chr1 21947647 21950411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00846 42 602 GRAS Transcription Factor Family AT3G03450 61.620 0.0 677
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu1g00846 GRAS 2e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00846 K14494 - gmx:100799695 941.028