Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00843 ATGGAGAACTTGCTGGGTCTACTGAGAATTCATGTTGAAAGAGGTGTCAATCTTGCTATCAGGGATGTGGTGAGCAGTGACCCTTATGTTGTTATCAAAATGGGCAAGCAGAAGCTGAAGACTCGGGTGGTCAAGAAGAATTTAAATCCTGAATGGAATGACGATCTGACCCTGTCTATTTCAGACCCTCATGCTCCAATCCACCTACATGTGTATGACAAGGACACATTCAGCTTGGATGACAAAATGGGGGATGCTGACTTTTCCATCGGTCCATTCATTGAAGCAGTGAAGATGCGCTTGGCAGGTCTCCCCAACAATACTATAGTTACAAAAGTGTTACCCAGCAGACAAAACTGCTTAGCTGAAGAGAGTCACATTGTCTGGAAGGATGGCAAAGTTGTGCAAAACATGGTTCTTAGACTAAGAAATGTAGAGTGTGGGGAGGTGGAACTCCAGTTGAATTGGATTGACATTCCTGGTTCAAGGCATCTCTAG 498 0.4438 MENLLGLLRIHVERGVNLAIRDVVSSDPYVVIKMGKQKLKTRVVKKNLNPEWNDDLTLSISDPHAPIHLHVYDKDTFSLDDKMGDADFSIGPFIEAVKMRLAGLPNNTIVTKVLPSRQNCLAEESHIVWKDGKVVQNMVLRLRNVECGEVELQLNWIDIPGSRHL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00843 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Lapu1g00843 165 Gene3D C2 domain 3 164 IPR035892 -
Lapu1g00843 165 CDD C2_ArfGAP 5 148 - -
Lapu1g00843 165 Pfam C2 domain 6 92 IPR000008 -
Lapu1g00843 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 91 IPR035892 -
Lapu1g00843 165 SMART C2_3c 7 102 IPR000008 -
Lapu1g00843 165 ProSiteProfiles C2 domain profile. 1 106 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00843 Lapu-Chr1 21918407 21921557 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00843 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 4.42e-50 156
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00843 - - pvu:PHAVU_001G230800g 319.316