Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00819 ATGGGTGATGCAATTGATTTGACTGGTGATGGAGGAGTCATTAAGACCATTGTGAGAAAAAGCAAAGCTGATGCTGTTGGTCCAACAGAAAATTTTCCTCTTGTTGATGTTCATTATGAAGGCACACTTGCTGATACTGGTGAAGTTTTTGACACAACACATGAAGATAACACTATCTTCTCTTTTGAGCTTGGAAAGGGTAGTGTTATCAAGGCTTGGGAGATTGCAGTCAAAACCATGAAGGTCGGAGAAGTTGCAAAAATAACTTGCAAACCAGAATATGCATATGGCAGTGCGGGATCTCCTCCAGATATTCCTCCAGAAGCAACACTTGTTTTTGAAGTTGAGTTAGTTGCCTGTCGACCAAGGAAGGGCTCCAGTTTGGGAAGTGTTTCAGAGGAGAGGGCCAGACTTGAAGAGCTGAAGAAGCAGAGAGAGCTAGCTGCTGCTGCCAAAGAGGAAGAGAAGAAGAAGAGAGAAGAAGCAAAAGCAGCTGCTGCTGCACGTGTGCAAGCCAAGTTAGAAGCCAAAAAAGGTCAAGGAAAGGGGAAAGGTAAAGCGAAGTAG 567 0.4427 MGDAIDLTGDGGVIKTIVRKSKADAVGPTENFPLVDVHYEGTLADTGEVFDTTHEDNTIFSFELGKGSVIKAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPEATLVFEVELVACRPRKGSSLGSVSEERARLEELKKQRELAAAAKEEEKKKREEAKAAAAARVQAKLEAKKGQGKGKGKAK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00819 188 Gene3D - 2 120 IPR046357 GO:0003755
Lapu1g00819 188 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 32 121 IPR001179 GO:0003755
Lapu1g00819 188 FunFam Peptidylprolyl isomerase 1 120 - -
Lapu1g00819 188 MobiDBLite consensus disorder prediction 150 166 - -
Lapu1g00819 188 SUPERFAMILY FKBP-like 8 124 - -
Lapu1g00819 188 MobiDBLite consensus disorder prediction 150 188 - -
Lapu1g00819 188 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 10 181 - -
Lapu1g00819 188 Coils Coil 131 170 - -
Lapu1g00819 188 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 34 118 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00819 Lapu-Chr1 21612677 21618574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00819 4 146 Calmodulin-binding Proteins AT5G48570 36.486 1.02e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00819 K01802 - gmx:100500018 265.774