Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00809 ATGGCGAATCGGTGGTGGGCTGGGAATGTGGGAATGATTAGAGAGCAAGAGTTGATGGAGAACAATAACAACGCCAATACTACTCCCACGAATAGCAGCAACAGCAACACGAACACTACGGAGGAAGAGGTGAGCAGAGACAACGGAGACGACCAGAACCAGAACCTCGGAAGCCACGAAGGTTCCGAGCCCGGAAGCGGCGGTCGGAGGCCACGTGGCAGGCCTCCCGGGTCCAAGAACAAGCCCAAGCCGCCGATCGTCATAACCAAAGAAAGCCCCAACGCGCTTCGAAGCCACGTGTTGGAAATCGCCAGCGGCAGCGACGTCGCAGAGAGCATCGCCGCCTTCGCCAACCGCCGCCACCGCGGCGTGTCGGTTCTGAGCGGCAGCGGCATTGTCACTAACGTTACTCTCCGCCAACCCGCCGCGCCCACCGGAGTCATCACCCTCCACGGAAGGTTCGAGATTCTCTCCCTCTCCGGCGCGTTTTTGCCCTCCCCTTCGCCGCCTGGCGCCACTGGACTCTCCGTTTATCTGTCCGGAGGACAGGGGCAGGTTGTCGGCGGAACCGTTGCGGGTTCTTTAGTGGCCTCCGGGCCGGTGATGGTGATAGCCGCCACATTCGCCAATGCTACTTATGAGAGGCTGCCGCTGGAGGATGAACAAGGTGAAGAGGAAATGCAAGTGCAACAACCGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAACAATCTCAGGGTTTGGGTGAACAAGTTTCAATGGCTATGTATAATTTGCCTCCTAATTTGCTACACAATGGTCAGAACATGCCTCATGATGTGTTTTGGGGAGCTGCTCCACCTCGTCCTCCACCTTCCTTCTGA 864 0.5775 MANRWWAGNVGMIREQELMENNNNANTTPTNSSNSNTNTTEEEVSRDNGDDQNQNLGSHEGSEPGSGGRRPRGRPPGSKNKPKPPIVITKESPNALRSHVLEIASGSDVAESIAAFANRRHRGVSVLSGSGIVTNVTLRQPAAPTGVITLHGRFEILSLSGAFLPSPSPPGATGLSVYLSGGQGQVVGGTVAGSLVASGPVMVIAATFANATYERLPLEDEQGEEEMQVQQPQQQQQQQQQQQQSQGLGEQVSMAMYNLPPNLLHNGQNMPHDVFWGAAPPRPPPSF* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00809 287 Gene3D - 96 238 - -
Lapu1g00809 287 MobiDBLite consensus disorder prediction 21 42 - -
Lapu1g00809 287 FunFam AT-hook motif nuclear-localized protein 96 224 - -
Lapu1g00809 287 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 278 IPR014476 GO:0003680
Lapu1g00809 287 MobiDBLite consensus disorder prediction 221 252 - -
Lapu1g00809 287 CDD DUF296 97 208 IPR005175 -
Lapu1g00809 287 PIRSF ESCAROLA 9 286 IPR014476 GO:0003680
Lapu1g00809 287 MobiDBLite consensus disorder prediction 21 93 - -
Lapu1g00809 287 ProSiteProfiles PPC domain profile profile. 93 230 IPR005175 -
Lapu1g00809 287 Pfam Plants and Prokaryotes Conserved (PCC) domain 97 209 IPR005175 -
Lapu1g00809 287 MobiDBLite consensus disorder prediction 227 252 - -
Lapu1g00809 287 SUPERFAMILY AF0104/ALDC/Ptd012-like 93 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00809 Lapu-Chr1 21529029 21529892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00809 1 287 AT-hook Motif Nuclear Localized (AHL) Family AT3G55560 54.430 1.15e-79 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00809 - - gmx:102667174 401.749