Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00798 ATGGCTGGGATTTGCTGTAGAGTTGTTGGAGAAGGTGACACACCCACTCCTCTTGAACCAACTTCTCGACTTTCCACACGACGAAGTATGGACATCATACCCTTGAAGTACATGGCTGATGTGGCCGACATGGCCGTGCCTGAGTCTTCTCGGAAGCGTCCCAAGCTCGATCTTAATGACTGCGATAATCAACTTCAAACTCTCCAGGAATCCTCTGGAATCAAGGTTATGAAGAAGGATTCCGAATTCGGCAACTATGAAGAAGAGGAAGACCCTTCCGACACTAAATCCGTGACAGACGACGACTCCTCCGAAGATGAAGAGTGTCCCAAGTATGGAGTCACCTCTGTCTGTGGCAGGAGGAGAGACATGGAGGACTCCGTTTCCTTGCACCCTTTCTTCTCGCTTGAAGGCTTCCACTACTTCGGCGTTTTTGACGGTCACGGTTGCTCTCATGTTGCCACTATGTGCAAGGAGAGGCTTCACGAGATTGTGAGCGAAGAGATTCTGGACGGAGATGATAATTTAGAGTGGAAATCAATGATGCACAGCGGTTTCGCTCGTATGGACCAAGAGGTCTTCCGTCGGAGCCAAAGCAACCAGACTTTCAACTGCAGGTGCGAGCTCCAGGCTCCGCACTGCGATGCCGTTGGATCCACTGCTGTCGTGGCTGTCCTCACGCCGGACAAAATTGTTGTCTCCAACTGTGGTGACTCCCGCGCTGTTCTGTGCCGCAATGGAGTGGCCATCCCTCTCTCCTCTGATCACAAGAACCCTTTCTTGATCTGTTTTGTTCAGCCGGATCGTCCGGACGAACTGCGCCGAGTGGAATCCAAGGGAGGGCGCGTGATTTACTGGGATGGTCCCAGAGTGCTGGGTGTGTTGGCTATGTCTCGAGCCATAGGTGACTATTACCTGAAGCCTTTCGTGATTTCTGAGCCAGAGGTGACTGTGACAGAGCGTAGCGATGAGGATGAGTGTTTGATACTGGCAAGTGATGGACTGTGGGATGTGGTTTCAAATGAAACTGCTTGCGGGGTCGTGAAGATGTGCCTGAAGTCGCACAAGCCCCAGACTCCCCCAGGGTCTCCAGGGAGTTGTGTGACTGCCGATGGATCGGACCAGGCTTGCTCTGATGCCTCGATTCTGTTGACAAAGTTGGCTTTGGCAAGACACAGTGCAGATAATGTGAGTGTGGTGGTGATTGATTTGAGAAAGGATCAAGGACAAACTCCCATTCCCACTCCCAACTACGTTAACCAGTGA 1266 0.5182 MAGICCRVVGEGDTPTPLEPTSRLSTRRSMDIIPLKYMADVADMAVPESSRKRPKLDLNDCDNQLQTLQESSGIKVMKKDSEFGNYEEEEDPSDTKSVTDDDSSEDEECPKYGVTSVCGRRRDMEDSVSLHPFFSLEGFHYFGVFDGHGCSHVATMCKERLHEIVSEEILDGDDNLEWKSMMHSGFARMDQEVFRRSQSNQTFNCRCELQAPHCDAVGSTAVVAVLTPDKIVVSNCGDSRAVLCRNGVAIPLSSDHKNPFLICFVQPDRPDELRRVESKGGRVIYWDGPRVLGVLAMSRAIGDYYLKPFVISEPEVTVTERSDEDECLILASDGLWDVVSNETACGVVKMCLKSHKPQTPPGSPGSCVTADGSDQACSDASILLTKLALARHSADNVSVVVIDLRKDQGQTPIPTPNYVNQ* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00798 421 Gene3D - 106 411 IPR036457 -
Lapu1g00798 421 FunFam Protein phosphatase 2C 50 109 410 - -
Lapu1g00798 421 SMART PP2C_4 99 402 IPR001932 -
Lapu1g00798 421 ProSitePatterns PPM-type phosphatase domain signature. 141 149 IPR000222 GO:0043169
Lapu1g00798 421 MobiDBLite consensus disorder prediction 86 107 - -
Lapu1g00798 421 Pfam Protein phosphatase 2C 111 396 IPR001932 -
Lapu1g00798 421 CDD PP2Cc 111 404 IPR001932 -
Lapu1g00798 421 MobiDBLite consensus disorder prediction 83 111 - -
Lapu1g00798 421 SUPERFAMILY PP2C-like 111 405 IPR036457 -
Lapu1g00798 421 ProSiteProfiles PPM-type phosphatase domain profile. 111 404 IPR001932 -
Lapu1g00798 421 PANTHER PROTEIN PHOSPHATASE 93 404 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00798 Lapu-Chr1 21428701 21430992 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00798 110 406 PP2C-type Phosphatase Gene Family AT1G07430 61.468 9.74e-137 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00798 K14497 - gmx:100776356 611.298