Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00762 ATGTCGGAGGCTTTGATCAATGGATTGGCCGGAGCTGGTGGAGGGATCATTGCTCAGCTCATCACATACCCACTTTCAACCGTAAACACTCGTCAACAAACCGAGCGTGATCCGAAGAGAGAGACCAGGAGTCAAGGTGCCCTCGAACGAATGTGCCAGGTTGTAAAAGAAGAAGGGTGGGAACGGTTGTATGGAGGTCTGATGCCATCTCTAGTGGGTTTCAATGTTTTAATATCTCACAATCTTATTGTACAGGGTGTTTACTATTATTTCTATCAAATATTCAGGAACAAGGCTGAAGCAGCTGCACTACAGCAAAAGAAAATGGGTGTCGGTGATGGATCAGTTGGGATGCTCTCCTCTCTTCTCACTGCTGCTTTATCTGGGTGTGTTAATGTGCTCTTGACAAATCCCATTTGGGTAGTTGTTACCCGTATGCAGGCACATAGAAAAGAGTCGAACCATGCACCTGATCAGGGTTTGTTAGTTGCCACTGAGCAAGCAATTATTCCTGCAGTTGAACCTCTTCCTTATGGAACTAGCCATGTGATTCAAGAAATCTTTGATGAAGCTGGTATTTGGGGTTTCTGGAAAGGTGTATTACCAACACTGATCATGGTAAGCAATCCTTCCATACAGTTCATGCTGTATGAAGCCATGTTGTCAAAGTTAAGAAAAAGACATAATAGGAGCAGGGTAACTGCTTTAGAGATATTTCTTCTTGGAGCTTTAGCTAAGCTTGGAGCTACTGTTGTAACTTATCCACTCCTAGTTGTAAAGGCACGGCTCCAGGCTAGACAGGATAAAACAGGAGACAGGAGGCACCATTACAAAGGTACTTGGGATGCTATTATTAAAATGATCCGCTATGAAGGGTTGAATGGGTTTTACAAAGGTATGGGCACAAAAATTGTACAAAGTGTGCTTGCTGCTGCTGTTATATTCACGATAAAAGAAGAACTAGTTAGGGGGTTTCACTTCTTGCTTGCCAAGGATGCTGCCAAAACTGTAAAGCTAAATCATGTGTGA 1029 0.4325 MSEALINGLAGAGGGIIAQLITYPLSTVNTRQQTERDPKRETRSQGALERMCQVVKEEGWERLYGGLMPSLVGFNVLISHNLIVQGVYYYFYQIFRNKAEAAALQQKKMGVGDGSVGMLSSLLTAALSGCVNVLLTNPIWVVVTRMQAHRKESNHAPDQGLLVATEQAIIPAVEPLPYGTSHVIQEIFDEAGIWGFWKGVLPTLIMVSNPSIQFMLYEAMLSKLRKRHNRSRVTALEIFLLGALAKLGATVVTYPLLVVKARLQARQDKTGDRRHHYKGTWDAIIKMIRYEGLNGFYKGMGTKIVQSVLAAAVIFTIKEELVRGFHFLLAKDAAKTVKLNHV* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00762 342 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 1 327 IPR044712 GO:0006862|GO:0055085
Lapu1g00762 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 94 IPR018108 -
Lapu1g00762 342 Pfam Mitochondrial carrier protein 116 227 IPR018108 -
Lapu1g00762 342 Pfam Mitochondrial carrier protein 6 74 IPR018108 -
Lapu1g00762 342 Pfam Mitochondrial carrier protein 234 325 IPR018108 -
Lapu1g00762 342 Gene3D Mitochondrial carrier domain 2 75 IPR023395 -
Lapu1g00762 342 Gene3D Mitochondrial carrier domain 76 325 IPR023395 -
Lapu1g00762 342 SUPERFAMILY Mitochondrial carrier 4 320 IPR023395 -
Lapu1g00762 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 233 324 IPR018108 -
Lapu1g00762 342 ProSiteProfiles Solute carrier (Solcar) repeat profile. 116 223 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00762 Lapu-Chr1 21059909 21066270 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00762 24 336 Chloroplast and Mitochondria Gene Families AT1G25380 26.959 8.73e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00762 K13354 - gmx:100775784 553.132