Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00760 ATGTACATGTTTTCCAGAACAATGTCTTCATCATCATCATCTTCTTCTTCTTGTGGTGATGCACCAACTATTCTCTCAAAATGCACTGTTCAGCCTAACCAAAATTCCACTATAGGAGATCTAAAGCTCTCTATCTCAGACCTAAACATGCTCCTCTCTCACTACATTCAAAAGGGATGTCTCTTCACCGCCCCATCTCTCCCCTCTCACACTCTCATCCCTCACCTCATCAACGCGCTTTCTCTCACCCTCTCCTTTTTCCCTCCATTAGCTGGTCGTCTCAAAACTGACCATCATGGCTACGTCTACATCGCATGCAACGATGCTGGCGTCGACTTCATCCACGCTACCGCCGCTCACATATCCGTTACTGACCTCCTGTCACCGTCCGATGTTCATCCAACCTTCAAACACCTCTTCCCTTTCCACCACAAAATTAGTTACACAGCTCATTCCTCCCCTATCATGGCCTTTCAGGTCACCGAGCTCGCTGACGGCCTTTTCATCGGTTGTGCTGTCTGCCACGCTGTCACCGACGGAGCCTCCTTCTGGAACTTCTTTAACACCTTCGCTGCAGTTTCTCAAGGAGCAACCTGTCCCTCCAGGCTCCCGGATTTTCGTCGGGATTCCATCCTCACCTCCAAGATCCTGCTTCGCCTGCCAAAAGAAATCAAGGTGACCTTCAATGTTGATGCACCCTATCGCGAGAGAATCTTCAGCTTCAGCCGTGAATCAATTAAGAAGCTGAAAGCCGAAGTGAATAACGGTGGGAAAGTTTGTTGGTTGGGGAATGTTGACAAAGGTGTGGAGTTGATGGCGAAGCTGAGCGAGGATACGCAGGTGAAAACGGTTACAAGAGGCGTAACAAACGAAACGACGGAGATCTCATCCTTTCAATCTCTGTGTGCGCTGATGTGGCGGTGCGTTACAAAGGCGAGGAACTTGGAAGGGCTTCAAGTGACGACGTTTCGAATGGCAGTTAATGTTCGGCAACGCATGGAACCGAAGTTGGGAGATCATTACTTTGGGAACGCGATTCAGAGCATTGCCACGCGTGCATCAGCAGGTGACGTGGTGTCTAGCGACCTTCGATGGTGCGCGGAGCAACTGAACAAAAGCGTACAGGCGTTTGATAGCGCTACGGTGTGCCGCAACGTGGAGAATTGGGAGCGCGAGCCAAAGTGCTTCGAGTTGGGGAACCACGATGGCGCCACTATGCAGATGGGAAGCTCGCCGAGATTTCCGATGTATGACAATGATTTTGGATGGGGCCGGCCCTTGGCAGTGCGGAGCGGTGGAGCGAACAAGTTTGATGGGAAAATGTCAGCGTTTCCCGGGAGGAATGGCGGTGGTAGCGTTGATTTGGAGGTGGTTTTGGCGCCTGACACCATGGAACAACTTCTCTCTGATCCCGAGTTCATGCTTTATGTGTCCGGTTAG 1440 0.5104 MYMFSRTMSSSSSSSSSCGDAPTILSKCTVQPNQNSTIGDLKLSISDLNMLLSHYIQKGCLFTAPSLPSHTLIPHLINALSLTLSFFPPLAGRLKTDHHGYVYIACNDAGVDFIHATAAHISVTDLLSPSDVHPTFKHLFPFHHKISYTAHSSPIMAFQVTELADGLFIGCAVCHAVTDGASFWNFFNTFAAVSQGATCPSRLPDFRRDSILTSKILLRLPKEIKVTFNVDAPYRERIFSFSRESIKKLKAEVNNGGKVCWLGNVDKGVELMAKLSEDTQVKTVTRGVTNETTEISSFQSLCALMWRCVTKARNLEGLQVTTFRMAVNVRQRMEPKLGDHYFGNAIQSIATRASAGDVVSSDLRWCAEQLNKSVQAFDSATVCRNVENWEREPKCFELGNHDGATMQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKMSAFPGRNGGGSVDLEVVLAPDTMEQLLSDPEFMLYVSG* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00760 479 Gene3D - 234 470 IPR023213 -
Lapu1g00760 479 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Lapu1g00760 479 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 24 474 - -
Lapu1g00760 479 Pfam Transferase family 23 474 - -
Lapu1g00760 479 Gene3D - 22 226 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00760 Lapu-Chr1 21036352 21038223 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00760 24 465 Monolignol Biosynthesis Gene Families AT5G48930 28.097 1.92e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00760 - - vum:124828482 741.11