Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00759 ATGTTTCTGGCTCACTACATCCAAAAGGGTTGTCTCTTCACCACCCCATCTCTCCCCTCTCACATTCTCATCCCTCACCTTACCAACGCTCTTTCTCGCACCCTCTCAATTTTTCCTCCTTTCGCTGGCCGTCTCAAAACTGATGACCACAGCTATGTCCATATAGCATGCAATGATGCTGGCGTTGACTTCATCCACGCTACCGCGGTCCATCTCTCTGTCACTGACCTCCTGTCACAGCCGGATGTTCACCCGGCCTTTAAGAAATTCTTCCCTTTCCACCACAAAATCAGTTACACCGCTCATTCCTCCCCCATCATGGCCTTTCAGGTCACTGAACTTGCTGACGGCATTTTCATCGGTTGCTCCGTCTGCCATGCTGTTACCGACGGTTCCTCCTTATGGAACTTCTTCAACACCTTTTCTGCTGTTTCTCGAGGAGGCGTCATATGTCCCTCTAGCCTCCCGGATTTTCGCCGGGAATCCATCCTCATCTCCAAAGTCGTTCTTCAAATGCCGGAAGAAATTAAGGTCACCTTCAATGTCGACGAACCCTTTCGCGAGCGAATCTTCAGTTTCAGCCGTGAATCAATTCAGAAGTTGAAAGCCTCAGTGAACAATGGTAGGAAAATGTTTCCTGCAGAGAAGGTTGACGTGGATGTTGAGCTAACGGCAAAGCTGAGCAATGACACAGAATTGAAAAAGCTTACAGTGGGCGGAACTGGCGAAACATCAGAGATTTCTTCGTTTCAGTCGTTATGCGCGTTGATGTGGCGTTGCGTGACAAGAGCAAGGAACGTGGAGAGGAGTAAAACGACGACGTTCCGAATGGCAGTTAATGTTCGGAACCGATTGGAGCCTAAGTTGGGAGATTGTTACTTCGGGAATGCGATTCAAAGCATTGTGACACATGCAGCAGTTGGTGAGGTGGTGTCCATGGGCCTGGGGTGGTGTGCGGAGCAGCTGAACAAGAGCGTGAAGGCGTACAGTAGTGATACCGTGCGTCTTAACGTGGAGCATTGGGAGCGTGAGCCAAAGTGCTTCGAGTTAGGGAACCATGACGGTGCCACCGTGCAGATGGGAAGCTCCCCGAGATTTCCGATGTACGATAACGATTTCGGGTGGGGACGACCATTGGCCGTGCGAAGTGGAGGAGCTAACAAGTTCGATGGCAAGCTGTCGGCGTTTCCGGGGAGATATGGCGGCGGCACCATCGATTTGGAAGTGATTTTGGGAGCTGAAACAATGGGGCGTCTGGAGTGTGATCCTGAGTTCATGATTTACGTGTGTGGG 1293 0.5097 MFLAHYIQKGCLFTTPSLPSHILIPHLTNALSRTLSIFPPFAGRLKTDDHSYVHIACNDAGVDFIHATAVHLSVTDLLSQPDVHPAFKKFFPFHHKISYTAHSSPIMAFQVTELADGIFIGCSVCHAVTDGSSLWNFFNTFSAVSRGGVICPSSLPDFRRESILISKVVLQMPEEIKVTFNVDEPFRERIFSFSRESIQKLKASVNNGRKMFPAEKVDVDVELTAKLSNDTELKKLTVGGTGETSEISSFQSLCALMWRCVTRARNVERSKTTTFRMAVNVRNRLEPKLGDCYFGNAIQSIVTHAAVGEVVSMGLGWCAEQLNKSVKAYSSDTVRLNVEHWEREPKCFELGNHDGATVQMGSSPRFPMYDNDFGWGRPLAVRSGGANKFDGKLSAFPGRYGGGTIDLEVILGAETMGRLECDPEFMIYVCG 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00759 431 Gene3D - 172 421 IPR023213 -
Lapu1g00759 431 Gene3D - 1 171 IPR023213 -
Lapu1g00759 431 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 1 426 - -
Lapu1g00759 431 Pfam Transferase family 2 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00759 Lapu-Chr1 21009616 21017720 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00759 13 420 Monolignol Biosynthesis Gene Families AT5G48930 27.842 3.00e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00759 - - vum:124828482 665.611