Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00722 ATGAACACAAAAAGCATCACCTCAAATCCTAGCCAACACAACAACCCCTCATCATGGGTTCTCTTCAGCACACTTCTTCTGTCGTCTTTGTCCCTCTCACTCTCCGATCCAAGGATCACCGAAGCAGGACTCTACTGTGGAACCACCAGGGCCCCTCTGAAAGCCAACTACATCCCAAGTTTCACCAAGGAAATGGAGAGCCTCTCGCAGTTGGTGACCAACCACAACTGGGGCACTCACTCTGTGAACACTTCAGGCTCGTCCATTCCCATTTATGGCTTGGCACAATGCTTCAACGACCTCTCCAACACCGATTGTCTTCTTTGCTACGCCGCAAGCCGCACCAAGCTCCCACGCTGCCTCCCTTCTGTCTCTGCCCACATCTACCTTGATGGCTGCTTCTTGCGCTATGACAACTACAACTTCTATGCTGAGGCCACTGACCCTTTGAGGGACACGGTGAACTGCACTTCGCAGTATGGGATGGCGGTTGATGGGTCTGAGAGGTTAGAGCTTGAAGAGAGAGCTGGAAGAGTGGTTGAGAGTGTGACCAATATAGCTGTGACAAAAGGTGGTGGCTTTGCTGTGGGAGAGGTTGAGGGGGTTTATGCATTGGCACAGTGCTGGAACACTATTGGAAGTGATGGATGCAGAGAGTGCTTGAGGAAAGCTGGGAGGGAGGTGAGAGGGTGCTTGCCAAAGAGGGATGGGAGGGCCTTGAATGCTGGCTGTTATTTGAGGTATTCAACAAACAAGTTCTACAATGAAGATGGCGATGAAGGAGGTAAAAATGGGTTCTTAAGAAGAGGAGGAGTCATAGTAGCAGAAGCGTTAGCAGCAGCTGCAGTTTTAATGCTCACTCTCTCTGCCTCCTATTTAGCCTTCATAAAATTAAATAAGATAAAAAAAGGTCTTCACTTTCTTATGCTGTGTTTCTTTTCTCCTGCATTACCAGAAAACCATAGTCATGGTCAGATTTCCACTTCCATAAGCAAATCTAGCTTGAATTACAAGTACGAAACTCTTGAGAAGGCCACAGATTATTTTAACTCTTCAAGAAAAATAGGCCAAGGTGGAGCTGGGTCAGTTTTCAAAGGTACTCTCCCAAATGGGAAAGTTGTTGCGGTTAAGAGATTGATCTTCAATAACAGGCAATGGGTGGATGAGTTCTTCAACGAAGTGAATTTGATTAGCGGAATTGAACATAAGAACCTTGTTAAACTATTGGGATGTAGCATTGAAGGCCCTGAGAGCCTTCTTGTGTATGAGTACTTACCCAAAAAGAGTTTAGACCAATTTATCTTTGGTCATGTACTAATCTGCTTTGCAGAAAAAAACAGAACTCAGATTCTAAACTGGAAGCAGAGGTTTAATATCATTCTTGGAACGGCAGAGGGGCTTGCATATCTTCATGAAGGCACCAAAATAAGAATCATCCATCGAGATATCAAAAGCAGCAACGTTCTTCTGGACGAGAATCTCACTCCCAAGATAGCAGATTTCGGCCTTGCCCGGTGTTTTGGAGCTGATAAGTCTCATTTGAGCACTGGAATTGCTGGAACACTAGGTTACATGGCTCCTGAGTACCTAATTAGAGGACAACTTACAGATAAAGCTGATGTATATAGTTTTGGAGTACTTGTTCTGGAGGTTGTAAGTGGCAGGAGGAATAATGTCTTTAGAGAGGACTCTGGCTCGCTTCTACAAACTGTTTGGAAACTTTACCGATCAAACACATTAACCGAAGCTGTTGATCCTTGTTTGGGAGATGATTCTGCTGCAACTGAAGCATCAAGGGTGTTTCAAATTGGATTGCTTTGCACACAAGCTTCTGCCTCCCTAAGACCATCCATGTCTCAAGTTGTTTATATGCTAATTAATTCAAATGAAGACGTTCCCACACCAAATCAACCCCCATTTTTGAACACTGGAATGCTGGACTCAGATAGTTCAATTAAGTCTTATAGCACTAACAGCTTCATATCCAATGCCTTGAAGAAGATTGGAGTATCCTACAGCTACTCAGAGTCCTCTAGTTCACGCAACTCAGATGGGCCATCAAGAAGTGAAGAATCAATTGTCCAAGTTTGA 2091 0.4452 MNTKSITSNPSQHNNPSSWVLFSTLLLSSLSLSLSDPRITEAGLYCGTTRAPLKANYIPSFTKEMESLSQLVTNHNWGTHSVNTSGSSIPIYGLAQCFNDLSNTDCLLCYAASRTKLPRCLPSVSAHIYLDGCFLRYDNYNFYAEATDPLRDTVNCTSQYGMAVDGSERLELEERAGRVVESVTNIAVTKGGGFAVGEVEGVYALAQCWNTIGSDGCRECLRKAGREVRGCLPKRDGRALNAGCYLRYSTNKFYNEDGDEGGKNGFLRRGGVIVAEALAAAAVLMLTLSASYLAFIKLNKIKKGLHFLMLCFFSPALPENHSHGQISTSISKSSLNYKYETLEKATDYFNSSRKIGQGGAGSVFKGTLPNGKVVAVKRLIFNNRQWVDEFFNEVNLISGIEHKNLVKLLGCSIEGPESLLVYEYLPKKSLDQFIFGHVLICFAEKNRTQILNWKQRFNIILGTAEGLAYLHEGTKIRIIHRDIKSSNVLLDENLTPKIADFGLARCFGADKSHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEVVSGRRNNVFREDSGSLLQTVWKLYRSNTLTEAVDPCLGDDSAATEASRVFQIGLLCTQASASLRPSMSQVVYMLINSNEDVPTPNQPPFLNTGMLDSDSSIKSYSTNSFISNALKKIGVSYSYSESSSSRNSDGPSRSEESIVQV* 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00722 696 ProSiteProfiles Gnk2-homologous domain profile. 151 253 IPR002902 -
Lapu1g00722 696 SUPERFAMILY Protein kinase-like (PK-like) 324 625 IPR011009 -
Lapu1g00722 696 Gene3D Transferase(Phosphotransferase) domain 1 425 636 - -
Lapu1g00722 696 CDD STKc_IRAK 355 625 - -
Lapu1g00722 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672|GO:0006468
Lapu1g00722 696 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 92 673 - -
Lapu1g00722 696 FunFam Cysteine-rich receptor-like protein kinase 3 154 253 - -
Lapu1g00722 696 ProSiteProfiles Protein kinase domain profile. 349 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00722 696 FunFam Cysteine-rich receptor-like protein kinase 2 39 142 - -
Lapu1g00722 696 Pfam Salt stress response/antifungal 194 250 IPR002902 -
Lapu1g00722 696 Pfam Salt stress response/antifungal 59 140 IPR002902 -
Lapu1g00722 696 Gene3D Phosphorylase Kinase; domain 1 316 424 - -
Lapu1g00722 696 Gene3D - 42 142 IPR038408 -
Lapu1g00722 696 Gene3D - 166 253 IPR038408 -
Lapu1g00722 696 FunFam Cysteine-rich receptor-like protein kinase 2 318 424 - -
Lapu1g00722 696 FunFam Cysteine-rich receptor-like protein kinase 2 425 633 - -
Lapu1g00722 696 SMART serkin_6 349 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00722 696 MobiDBLite consensus disorder prediction 674 696 - -
Lapu1g00722 696 ProSiteProfiles Gnk2-homologous domain profile. 39 142 IPR002902 -
Lapu1g00722 696 Pfam Protein kinase domain 350 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00722 Lapu-Chr1 20427670 20431327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00722 20 522 Receptor kinase-like Gene Family AT5G40380 54.257 0.0 532
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu1g00722 Pkinase 2.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00722 - - gmx:100790404 1088.56