Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00701 ATGGAAAGAGTTTCTACATGGATAGCATTTGCCACATTCCTTTTCCTCCTGAACATGACCACTTGTGTAGAGTATGAGGTCAAGAGAACACTGATACAATTTCTTGCTCAAGTCTCTGGTAACGATGGCCAGCTGACCTCTTCTGTGGTATGGAAACTAGACTCTGATCCCTGCAAGGGCCACTGGCAAGGTGTACACTGTGATCCTCAAAACATGACCATAAAGGGGTTGCTACTTGATAAGCTCAATTTCTCTGGAACACTTGATATTGCTATGCTTTGCAACTTGCAGCCTCTGGCTGCATCTCTCGCATATATTAGCCTTGATGGCAACAAAATTAGTGGGGGGATAGCATCTGAGGTTGGAAATTGCAAACAACTCACTCGCCTGCACCTAAGTGGAAACCAACTTGCTGGAGACCTTCCCAGTTCACTTGCTATGTTGAACAATTTGAAGAGATTGGACATTTCAAATAACCAGTTTTCTGGACCTTTACCAAACTTGTCTAGAATCTCAGGGCTGAACATCTTCCTTGCACAGAACAATTATCTTGGAGGAACTATACCTGCTTTTGAGTTCTCCAATTTTGAACAATTCAATGTCTCCTTTAACAATTTCCGAGGCCACATTCCACACGTGTATGGATATTTCTCTGTTGACAGCTTTCTTGGTAATCCTGAACTATGTGGAGATCCACTGCCAAAGAATTGCTCTGATCAGCCTATGCCTGTTAGTGAGGCTCAGATATCAGAAGAATCAAAGGGTCCTCCTAAGGAGCAGATTCTTATGTACTCAGGCTATGCTGCATTGGGTGTTATCATTGTCCTTTTCGTAGTCTTAAAGCTGTGTAGAAGAAAGAAGGGAGAGAATAAAATTGAAGCATTGAATAATGGGGTAGGGGCCACTGGTGGTGATGTTGAAAAGCCGAGCACTGTTTCAAGTGAATACAAAACTGAGGTAAGCAGATCTGAGTTTTCAGTCCCTTCTGAAAGTGGGATGGTTTCACAATCGCTTGTAGTTCTTTCAAGCCCAGCGACAATGCAATTGAGATTGGAGGACTTGTTGAGGGCCCCTGCAGAATTGATTGGAAGAGGAAAAAATGGAAGTCTTTATAAGGTGATGCTTGATAATGGGACAATGGTAGTTGCTAAAAGGATCAAGGATTGGACTATTTCAAGCCACGATTTCAAACAAAGAATGCGAATACTGAGCCAAGCAAAGCACCCTCATGTCCTAGCACCTCTTGCTTTCTATTGTTCTAAACAAGAGAAGCTTTTGGTGTATGAATATCAGCAGAATGGCAGTTTATTCAAGCTTCTACATGGTACTACAAAAGCCTTAGACTGGACCAGCAGACTTGGGATTGCAGCTACAATTGCTGAGGCATTAGCATTCCTGCACCAAGAGCTAGGCCATCATGGTATTGTTCATGGTAATCTGAAATCCTCAAACATTTTGCTAAACAAGAATATGGAGCCATGCATAAGTGAATGCGGTATCATGAATGTGGATGATGAAAGAGGTTCAGCTTTTGGCAGTTGTAGTGATGCTGGTGCATTAGATATCTTAAAGGGAGATGTTTATGGCTTTGGTGTGATTCTTCTTGAACTGCTTACTGGTAAGTTAGTGAAGGGAAATGGGATTGATTTGACTGATTGGGTTCAATTAGTTGTGAGAGAAGAATGGACAGGAGAAGTGTTTGACAAGTCCCTAATATCAGAGTATGCAAGCGAAGAGAGGATGGTGAATTTGCTTCAAGTGGCTATAAGATGTGTTAATCGTTCACCAGAGGCTAGGCCAACCATGAACCAAGTTGCTCTAATGATTAACACTATCAAAGACGACGAAGAAAAATCCTTGATCTACCAAGTGTGA 1875 0.4208 MERVSTWIAFATFLFLLNMTTCVEYEVKRTLIQFLAQVSGNDGQLTSSVVWKLDSDPCKGHWQGVHCDPQNMTIKGLLLDKLNFSGTLDIAMLCNLQPLAASLAYISLDGNKISGGIASEVGNCKQLTRLHLSGNQLAGDLPSSLAMLNNLKRLDISNNQFSGPLPNLSRISGLNIFLAQNNYLGGTIPAFEFSNFEQFNVSFNNFRGHIPHVYGYFSVDSFLGNPELCGDPLPKNCSDQPMPVSEAQISEESKGPPKEQILMYSGYAALGVIIVLFVVLKLCRRKKGENKIEALNNGVGATGGDVEKPSTVSSEYKTEVSRSEFSVPSESGMVSQSLVVLSSPATMQLRLEDLLRAPAELIGRGKNGSLYKVMLDNGTMVVAKRIKDWTISSHDFKQRMRILSQAKHPHVLAPLAFYCSKQEKLLVYEYQQNGSLFKLLHGTTKALDWTSRLGIAATIAEALAFLHQELGHHGIVHGNLKSSNILLNKNMEPCISECGIMNVDDERGSAFGSCSDAGALDILKGDVYGFGVILLELLTGKLVKGNGIDLTDWVQLVVREEWTGEVFDKSLISEYASEERMVNLLQVAIRCVNRSPEARPTMNQVALMINTIKDDEEKSLIYQV* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00701 624 Gene3D Transferase(Phosphotransferase) domain 1 432 623 - -
Lapu1g00701 624 FunFam Leucine-rich repeat receptor protein kinase EMS1 94 191 - -
Lapu1g00701 624 SUPERFAMILY Protein kinase-like (PK-like) 359 609 IPR011009 -
Lapu1g00701 624 SUPERFAMILY L domain-like 51 216 - -
Lapu1g00701 624 PANTHER OS05G0588300 PROTEIN 10 614 - -
Lapu1g00701 624 Gene3D Ribonuclease Inhibitor 191 240 IPR032675 -
Lapu1g00701 624 Gene3D Ribonuclease Inhibitor 26 190 IPR032675 -
Lapu1g00701 624 Pfam Leucine Rich repeats (2 copies) 125 168 IPR025875 -
Lapu1g00701 624 ProSiteProfiles Protein kinase domain profile. 356 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00701 624 Gene3D Phosphorylase Kinase; domain 1 328 430 - -
Lapu1g00701 624 ProSitePatterns Protein kinases ATP-binding region signature. 362 384 IPR017441 GO:0005524
Lapu1g00701 624 Pfam Protein tyrosine and serine/threonine kinase 360 606 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00701 Lapu-Chr1 20060602 20062668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00701 30 613 Receptor kinase-like Gene Family AT1G68400 34.236 1.35e-87 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu1g00701 PK_Tyr_Ser-Thr 1.9e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00701 - - gmx:100813796 1023.08