Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00699 ATGTCAGGGAGGTATTGTTACAAGGAAGTGCTTCCGTTTACTGCAATGGTTGCCGTGGAGTGCACCAACGTTGGTGTAAACGTTCTATTCAAAGCAGCAACTGAGAAGGGGCTGAGTTATTATGCCTTCATCGCTTATTCATTTCTCATCTCTTCTCTCTTTCTCCTTTTGCCTCTTCCCTTCGTCTTCCCACGTTCAAGAGGCCTTCCACCGCTCAACCTCCCTCTCATCTTCAGAATTTTCCTCCTTGGAGTAATTGGATTGGTAGCTCAGCTTTGTGGATACAAGGGACTGAATTACACTTCGCCTACTCTTGCATCTGCTCTCAGCAATCTCATACCTGCTTTCACCTTCATATTGGCTATCATTTTCAGGATGGAAAAGGTAGCTCTGAGAAGCTCAAGAACTCAGGCCAAAATCCTGGGTTCTTCCATATCCATATTAGGTGCACTCATAGTTTTACTCTATAAGGGTCCCATAATCTTTTCAACTTCATCTCCACAACTATCTCCTAAGGTTCATTCTCCAATGGAATCTACATCACAAACAAATTGGGTTCTTGGTGGATCCCTTCTTGCCACTGAGTATCTTTTGGTTCCAATCTGGTACATTGTTCAGACCAATATTATGAAACAATACCCAGCAGAGTTTATTGTGGTGTTCCTGTACAACCTGAGTGGAACTCTGATATCTGCACCAATTTGCTTGCTATTAGAAACAAATTTGAGTGCTTGGAAGATAAATCCTGATGTAACATTGATGGCTATTATATATTCGGGATTCTTTTGCACAGGCCTAAGTAGTTTGGTTCACACTTGGGGCATTCATCTTAAAGGCCCAGTTTATGTATCAATCTTCAAGCCTCTGTCCATTGTGGTGGCTGCCGTTTTAAGTGTTGTCTTCCTCGGTGATGCACTGTATTTTGGAACTGTTGTTGGAGCAGTGATACTCTCATTTGGGTTTTATGCTGTCATATGGGGCAATGCAAAAGAAGAGGAATTGAGTGAGAACTTTGACATGAGTCCTCCATCAAGTAGTAAGAGTCCTTTGTTGCTGAGCTACAAAGGGAAAGATAACGAAGAGATCAACCGTAGTTGA 1098 0.4235 MSGRYCYKEVLPFTAMVAVECTNVGVNVLFKAATEKGLSYYAFIAYSFLISSLFLLLPLPFVFPRSRGLPPLNLPLIFRIFLLGVIGLVAQLCGYKGLNYTSPTLASALSNLIPAFTFILAIIFRMEKVALRSSRTQAKILGSSISILGALIVLLYKGPIIFSTSSPQLSPKVHSPMESTSQTNWVLGGSLLATEYLLVPIWYIVQTNIMKQYPAEFIVVFLYNLSGTLISAPICLLLETNLSAWKINPDVTLMAIIYSGFFCTGLSSLVHTWGIHLKGPVYVSIFKPLSIVVAAVLSVVFLGDALYFGTVVGAVILSFGFYAVIWGNAKEEELSENFDMSPPSSSKSPLLLSYKGKDNEEINRS* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00699 365 MobiDBLite consensus disorder prediction 338 352 - -
Lapu1g00699 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 330 - -
Lapu1g00699 365 PANTHER WAT1-RELATED PROTEIN 11 340 IPR030184 GO:0016020|GO:0022857
Lapu1g00699 365 Pfam EamA-like transporter family 201 325 IPR000620 GO:0016020
Lapu1g00699 365 Pfam EamA-like transporter family 25 154 IPR000620 GO:0016020
Lapu1g00699 365 MobiDBLite consensus disorder prediction 336 365 - -
Lapu1g00699 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00699 Lapu-Chr1 20026468 20030787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00699 4 359 Nodulin-like Gene Family AT5G40240 53.911 2.75e-138 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00699 - - gmx:100805667 567.77