Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00694 ATGCCTGTGCTAGAACACTTGGACTTCTCCATAGAGGAAAATCAAGTCATTGCCATTCTCTACCTTGTCAAGGTTGGAATGAGCGGTAGTGGAAAGAGCACATTACTCAACCTTTTACTTCGTCTCTATGAGCCTAGTAGTGGTCAGATATATATTGATGGGTTCCCTCTGAAAGAGTTGGATATCCGGTGGCTGCGTCAGCACATTGGATATGTTGCACAGGAATCCCATCTCTTTCATATGGACATCAAGTCAAACATAAAGTATGGTTGCCCTGGGAACATAAAACAAGAAGATATTGAATGGGCGGCCAAAAAGGCCAATGCCCATGATTTCATTTCTTCTCTTCCTAATGGATATGAAACCCTTGTTGATGACAATGCACTTAGTGGTGGACAAAAGCAGCGAATTGCCATCACCAGAGCCATTCTTAGAGACCCTGTTATACTGATACTTGATGAAGCAACCAGTGCTCTAGATTCTGAGAGTGAGCACTATATCAAGGAGTCGCTGTATGCGTTAAAAGATGAATCTAAAACAAGAACCATCATTATCATAGCTCATAGGCTTTCTACTACAAAAGCTGCTGATAAGATCTTTGTTATGGATGATGGTCGCATCGTTGAGATGGGAGATCATGAAGAGCTTATGCTCAAAGATGGGCTCTATGCAAAATTAAACAAAATTCAAGCAGATATTTTGACTTGA 708 0.411 MPVLEHLDFSIEENQVIAILYLVKVGMSGSGKSTLLNLLLRLYEPSSGQIYIDGFPLKELDIRWLRQHIGYVAQESHLFHMDIKSNIKYGCPGNIKQEDIEWAAKKANAHDFISSLPNGYETLVDDNALSGGQKQRIAITRAILRDPVILILDEATSALDSESEHYIKESLYALKDESKTRTIIIIAHRLSTTKAADKIFVMDDGRIVEMGDHEELMLKDGLYAKLNKIQADILT* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00694 235 FunFam Multidrug ABC transporter ATP-binding protein 1 233 - -
Lapu1g00694 235 Pfam ABC transporter 4 157 IPR003439 GO:0005524
Lapu1g00694 235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1 229 IPR003439 GO:0005524
Lapu1g00694 235 PANTHER ABC TRANSPORTER B FAMILY 2 227 IPR039421 -
Lapu1g00694 235 SMART AAA_5 13 206 IPR003593 GO:0016887
Lapu1g00694 235 Gene3D - 2 230 IPR027417 -
Lapu1g00694 235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 230 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00694 Lapu-Chr1 19938628 19960729 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00694 3 230 Calmodulin-binding Proteins AT2G36910 51.293 4.57e-63 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00694 - - vum:124820309 420.239