Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00690 ATGGGGTCACCTGTTAATGGATTGGATTCTTTATCAGAGGTTCAGAATTCAGTTTCTGTGGTAGATCATGATCCTCCTTCAACATCAGGGATTCCCCGGCCATCTCGGCCGCCGTTAAGCACATCTAGAAATCATGGGGCTTCTTCCAGTCAGCCTAACTATGGAATGAAGACCGGCCACCATCAAAAGCACTCATATCAGGAGGCTGACGACGTAGAGAGAGATGGAATGCCCAATATGGAGAAGCAGTATTTCAACACAAATGGCAAATCTGAGTATGTGAGCCTCAATAAAGCTGTTGAAAGTTGTTTAGGAAAGAATATCTCCAAAATGGAAACAAAATTAAGTATCAAGAAACCGTTAGATGCTTCCAAGAACTGCGATTCTAGTGGCGTATTAGAATCTGACAATTGCAAATTAGGTTCGTCAAAAGGCGTTGTTGATGGAACAAAGAGTTACTGTCAATCAGAGATTACCTTTTGTCCAAGTCCTCAGAATAGTTTCTATTCAGAAGCCAAGGAGAGTTTTGCCAATACTGGAGTCAGTGAATGTGTTAGTGTTGATAAGTCAGTTGAAAGTGGAGAAGTTACTAATTCCTGTGAATTTAACGAGAGCCGGAAGACCAGCATCTGTAGAGGCAGCACTGGAAGTGACGTTAGTGATGAGAGCAGCACTAGTAGTCTGAGCAGTGCTTTGTATAAGCCCCACAAGGCAAATGATATAAGATGGGAAGCAATTCAAGCGATCCGAGTCCGTGATGGGGTGTTGGAGATGAGACATTTCAGGTTATTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTTTATCTAGCTGAATTAAGTGGCACGAGGACTTGTTTTGCAATGAAAGTAATGAACAAAACCGAGTTGGCAAGTCGCAAGAAGCTTGTTAGGTCTCAGACAGAGAGAGAGATACTGCAGTCTCTAGATCATCCATTTCTACCCACATTGTATACGCACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTTTGTCCAGGTGGGGACTTGCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCTGAGATTGCTGCCAGGTTTTATGTGGCAGAAGTTCTCCTTGCCTTAGAGTACTTGCATATGCTTGGGGTCATCTACAGAGATCTGAAGCCCGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTTTCAGATTTTGATCTCTCTCTAAGGTGTGCTGTGAGTCCAACTCTAGTGAAGTCATCAAACTCTACCTTGGAGACAAAAAGCTCAGGATACTGCATTCAGCCTGCCTGCATAGAGCCAACTTGTGTAATACAGCCAGACTGCATTCAACCATCATGCTTCACACCGCGATTTCTCTCCGGCAAATCCAAGAAAGAAAAGAAGTTGAAGCCAAAGAATGATGTGCAGAATCAGGTGACCCCACTTCCCGAACTTATTGCCGAGCCCACGAATGCTCGATCAATGTCCTTTGTGGGGACACACGAGTACCTGGCACCTGAAATCATCAAAGGTGAAGGGCATGGAAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTATATGAGCTCTTGTTCGGTAGAACACCGTTCAAAGGTTCGGCAAACCGAGCAACGCTATTCAATGTTGTTGGGCAGCCCTTGAAATTTCCAGAATCTCCCACTGTGAGCTTTGCTGCCAGGGACTTGATCAGAGGTTTACTTGTGAAAGAGCCTCAGAATCGCCTTGCTTATAGACGAGGAGCAACAGAAATAAAACAACATCCATTTTTTCATAATGTTAACTGGGCGCTGATCCGTTGTGCAAATCCTCCAGAGGTTCCAAGACAGGCAATGAAAGCACTTGCAGCTGAAAAAGTGCCTGGAGTGAAGCCTTCTGGTAACTATTTAGATATTGATTTCTTTTGA 1929 0.4401 MGSPVNGLDSLSEVQNSVSVVDHDPPSTSGIPRPSRPPLSTSRNHGASSSQPNYGMKTGHHQKHSYQEADDVERDGMPNMEKQYFNTNGKSEYVSLNKAVESCLGKNISKMETKLSIKKPLDASKNCDSSGVLESDNCKLGSSKGVVDGTKSYCQSEITFCPSPQNSFYSEAKESFANTGVSECVSVDKSVESGEVTNSCEFNESRKTSICRGSTGSDVSDESSTSSLSSALYKPHKANDIRWEAIQAIRVRDGVLEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELASRKKLVRSQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEIAARFYVAEVLLALEYLHMLGVIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSSNSTLETKSSGYCIQPACIEPTCVIQPDCIQPSCFTPRFLSGKSKKEKKLKPKNDVQNQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLKFPESPTVSFAARDLIRGLLVKEPQNRLAYRRGATEIKQHPFFHNVNWALIRCANPPEVPRQAMKALAAEKVPGVKPSGNYLDIDFF* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00690 642 MobiDBLite consensus disorder prediction 34 60 - -
Lapu1g00690 642 SUPERFAMILY Protein kinase-like (PK-like) 237 617 IPR011009 -
Lapu1g00690 642 Gene3D Transferase(Phosphotransferase) domain 1 492 616 - -
Lapu1g00690 642 Gene3D Phosphorylase Kinase; domain 1 259 344 - -
Lapu1g00690 642 SMART serkin_6 261 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00690 642 ProSiteProfiles Protein kinase domain profile. 261 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00690 642 FunFam Serine/threonine-protein kinase D6PK-like 259 344 - -
Lapu1g00690 642 PANTHER FLIPPASE KINASE 1-RELATED 88 620 - -
Lapu1g00690 642 Gene3D Transferase(Phosphotransferase) domain 1 345 413 - -
Lapu1g00690 642 Pfam Protein kinase domain 262 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00690 642 Pfam Protein kinase domain 495 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00690 642 MobiDBLite consensus disorder prediction 1 24 - -
Lapu1g00690 642 FunFam serine/threonine-protein kinase D6PK-like 493 616 - -
Lapu1g00690 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 382 394 IPR008271 GO:0004672|GO:0006468
Lapu1g00690 642 FunFam serine/threonine-protein kinase D6PK-like 345 412 - -
Lapu1g00690 642 MobiDBLite consensus disorder prediction 1 70 - -
Lapu1g00690 642 CDD STKc_phototropin_like 259 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00690 Lapu-Chr1 19862080 19866490 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00690 165 642 AGC Kinase Gene Family AT5G47750 70.683 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu1g00690 Pkinase 6.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00690 K08286 - gmx:100802402 1164.83