Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00687 ATGGCATACCTCAATCAGCCACTCACGGTGATGTTCTTTTCTATCCTTTTGTCTCTTGCAGCAGTTCAGCCATCTTTGGCTCTGCATAAACCCCCAAACCAAAACCAAACAATGGCTTACATAGAGTCCTCTTGTCAAGGAACCAGGTACCCGGATCTCTGTATACGATGCCTATCCAGATTTTCAAATTCCACCATAGATGGCCCCCAGCACTTGGCTCATCTTGCCCTTTCGGTTAGCCTCTTCAGAGCCCTAAAAACTAAGGGCTACTTATTAAAAGTGGTCAAGGAACTTGAGGAGTTCAAGAATAATAGAGTGTACCTTACTGTGCAAGATTGTGTGACGCAAATCAATGATAGTGTGGACCAACTTTGCCAAGCCATAAAAGAGCTCCGCAGGCTGAACAAACGCACCATTATAGATGACAACTTCTTGTGGCACATAAGCAATGTCGAGACATGGGTGAGCACTGCCTTAACAGATGCTAGCTATTGTGTTCAATCGTTCCCTGGAACAAGGATGAGTAAGAGGACAGCTACTATAAAGGTTAAGGCACAAAATGTTGCAGAGCTCACTAGTAATGCACTGAATTTATTTCATAGATACGCTTCTAGGTACCATGTAGAAGCTACATCCACCAAGAAACCCTAA 651 0.4378 MAYLNQPLTVMFFSILLSLAAVQPSLALHKPPNQNQTMAYIESSCQGTRYPDLCIRCLSRFSNSTIDGPQHLAHLALSVSLFRALKTKGYLLKVVKELEEFKNNRVYLTVQDCVTQINDSVDQLCQAIKELRRLNKRTIIDDNFLWHISNVETWVSTALTDASYCVQSFPGTRMSKRTATIKVKAQNVAELTSNALNLFHRYASRYHVEATSTKKP* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00687 216 Pfam Plant invertase/pectin methylesterase inhibitor 40 198 IPR006501 GO:0004857
Lapu1g00687 216 SMART PMEI_2 36 198 IPR006501 GO:0004857
Lapu1g00687 216 CDD PMEI-like_3 43 204 - -
Lapu1g00687 216 NCBIfam pectinesterase inhibitor domain 8 201 IPR006501 GO:0004857
Lapu1g00687 216 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 202 IPR035513 -
Lapu1g00687 216 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 198 - -
Lapu1g00687 216 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 202 IPR035513 -
Lapu1g00687 216 FunFam Pectinesterase inhibitor 3 36 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00687 Lapu-Chr1 19812068 19812718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00687 10 199 Carbohydrate Esterase AT3G49220 26.131 1.52e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00687 - - pvu:PHAVU_002G180000g 301.212