Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00685 ATGTCCAAGATACGCGGATTCAACCTCAGGAAGCGCCTGATCCGGGTCTCCAAATGGGTCTTCTGGAAGATCCGGGTCAGGGGCCGACCCGGATACCACCGCCTGGGCAACTCTCCTCGCTCGCCCATCGCGAAACTCCTCTCCTGGGGACGCAAGCTCACGGCGGGAGCCAAGTCCTTCTTGACAATGACATCCGGCTCCGGTTACGCCCAGTTAGGATCCGGCACCGAACTAGGATCCGACCGGGATCCGAATGTTCCCAAGGGATATCTAGCCGTGTACGTGGGGCAGAAGGATGGCGAGTTGCACCGTGTGCTGGTGCCGGTGATATACTTCAACCATCCTTTGTTTGGGGAATTGCTGAAGGAGGCAGAGGAGGAGTTCGGGTTTCACCACGACGGGGGAATCACCATCCCCTGCCGGTTCACAGAATTTGAACGCGTCAAGACCCGAATAGCGTCCGGGTGTCGCCGGAGCACCCGTCCAAAAAGGTTGGCTTGGGGAGAATTGAAGTGA 516 0.5833 MSKIRGFNLRKRLIRVSKWVFWKIRVRGRPGYHRLGNSPRSPIAKLLSWGRKLTAGAKSFLTMTSGSGYAQLGSGTELGSDRDPNVPKGYLAVYVGQKDGELHRVLVPVIYFNHPLFGELLKEAEEEFGFHHDGGITIPCRFTEFERVKTRIASGCRRSTRPKRLAWGELK* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00685 171 Pfam Auxin responsive protein 77 149 IPR003676 GO:0009733
Lapu1g00685 171 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 67 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00685 Lapu-Chr1 19782756 19784470 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00685 84 145 Calmodulin-binding Proteins AT3G43120 54.839 7.98e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00685 K14488 - gmx:100783436 270.781