LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu1g00641	ATGCCAAGTGTGGCTGTCAAGCTCTACAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTTTGCAGAACCGGATCCAAACCTCTTCCCAACACTCCGACCCGTTTGGTGTTACTACCCGACCCGAAGAGTCTGTCGCCGCCGCCAACCCCTCCTTCGCCGACGGCGTCGCCACCAAAGACATCCACATCGACCCCTTGACCTCTCTCTCCATCCGAATCTTCCTCCCCGAATCGGCCCTCACCGCTCCCGAGCCTCATTCCAAACCTAAGACTCGCTCCAATCCCGAGCCTCAGCCTCGATCCGCGCGCCTCGATTCGATTGCGCGGAGGAACAGCTATGGGCCGCCGGTCCTGGAGGAGAGACGGAGCAACAGCTTCGGAGGGGGCTCCGCCGTGGATGGTTTGAATCTGATGTCAGACGGCGCCTACCGGGGCTACTCGCCGCCGTCGGGGACGCAAGGGGAGCGGCGGAGGCTGCCGGTGGTTCTGCAGTTCCATGGCGGGGGGTGGGTTAGCGGAGGGAGTGATTCTGCGGCGAATGATGTTTTCTGCCGGCGGATCGCGGGGTTATGTGATGTGATAGTGATTGCGGTGGGGTACCGGCTGGCACCGGAGAACCGGTACCCGGCGGCGTTCGAGGACGGCGTGAAGGTGCTGAATTGGCTGGCGAAGCAGGCGAATTTGGCGGAATGTAGCAGGTCGATGGGGGGTGGCAGGAGTGGAGGGCATGGTGGTGGGGAGTTCAAGAAATCGGATGCTCACAAGCATATTGTTGATTCCTTTGGGGCTTCTGTGGTTGAGCCTTGGCTTGCTGCTCACGCTGATCCTTCAAGATGTGTTCTTCTTGGAGCAAGTTGTGGTGCCAATATTGCAGACTATGTAGCTCGTAAAGCTGTGGAAGGAGGCAAACTTCTAGACCCTGTGAAGGTGGTAGCACAGGTTCTAATGTATCCATTTTTCATTGGAAGTGTTCCCACACGGTCTGAAATAAAGTTGGCAAACTCTTACTTTTATGACAAAGCCATGTGTACGCTTGCATGGAAACTTTTCCTACCTGAGGAGGAATTTAGTTTGGACCATCCGGCTGCTAATCCCCTTGTCCCGGGTCGAGGTCCTCCTTTAAAGTTAATGCCTCCAACATTGACAGTTGTGGCCGAACACGACTGGATGAGGGATCGAGCCATTGCATACTCAGAGGAGCTCCGGAAGATGAATGTGGATGCACCTGTTCTTGAGTATAAGGATGCTGTACATGAATTTGCAACACTTGATGTCCTTCTCAAAAGCCCTCAGGCCCAGGTTTGCGCTGAGGACATAGCCATATGGGTGAAGAAATATATTTCACTTCGGGGTCATGAATTCTCATATTGA	1371	0.5478	MPSVAVKLYSVFFKFLLKHRLQNRIQTSSQHSDPFGVTTRPEESVAAANPSFADGVATKDIHIDPLTSLSIRIFLPESALTAPEPHSKPKTRSNPEPQPRSARLDSIARRNSYGPPVLEERRSNSFGGGSAVDGLNLMSDGAYRGYSPPSGTQGERRRLPVVLQFHGGGWVSGGSDSAANDVFCRRIAGLCDVIVIAVGYRLAPENRYPAAFEDGVKVLNWLAKQANLAECSRSMGGGRSGGHGGGEFKKSDAHKHIVDSFGASVVEPWLAAHADPSRCVLLGASCGANIADYVARKAVEGGKLLDPVKVVAQVLMYPFFIGSVPTRSEIKLANSYFYDKAMCTLAWKLFLPEEEFSLDHPAANPLVPGRGPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKMNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRGHEFSY*	457

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu1g00641	456	MobiDBLite	consensus disorder prediction	81	126	-	-
	Lapu1g00641	456	PANTHER	ARYLACETAMIDE DEACETYLASE	53	421	-	-
	Lapu1g00641	456	Gene3D	alpha/beta hydrolase	37	450	IPR029058	-
	Lapu1g00641	456	Pfam	alpha/beta hydrolase fold	162	421	IPR013094	GO:0016787
	Lapu1g00641	456	SUPERFAMILY	alpha/beta-Hydrolases	53	447	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu1g00641	Lapu-Chr1	19042556	19046524	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu1g00641	1	456	Carbohydrate Esterase	AT3G27320	75.109	0.0	678

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu1g00641	-		-	gmx:100791894	810.061