Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00639 ATGGTCGTGGGTTCCTTCACTCTAACTTCTAATACGAAGAGAAGGGCCACCTACAAATTTTCCACCGACATGGACACTGAAGCTGCCACCAAGATCAAACTTGATGAAGTGAAAGAAAGAGTTGGGCGAGAGATTCGTGTTTTTGAAACATTTGTTTCTTCATCATCAAATGCTGCATTATCCAATGAAGAGGTGACTGATGACTTCTATGAGTTTACTGCTGAAGATTATCACAGACTTTTGGCAGCTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCAGCACGTAGGTCGGAAATGACCAAGGCTATAATTAGAGTTCGCTTCCCAGATAATCACACATTGGAGACTACCTTCCACCCATCAGAAACAGTCCAGAGTTTAATTGATGTCCTGACTAAAGTTGTTGCACTGCCAGAGCAACCATTCTATATATATACTACTCCGCCTAAAAAGATTATGAAAGATATGTCTCAGAATTTTTATGATGCTGGCTTTTGTCCTGGTGCCATTGTGTACTTCTCATACGATGTCCCAAAAGGTAGCACTGGTCCTTACCTTCAAGAAGATATATTGTCTTTGAAGGAATTGCATGCTGCTAATGATCAAGGCCAACAATCTGAGCCTTCAGTACAGTCAGAACCGGAACCTGCTGTGGCAACACATCCTCCTGTTGAACAACGCAAACCTGCTGAGAAAAAGCTTGTTAAGCCGAAGTGGTTAAAAATGTGA 753 0.4157 MVVGSFTLTSNTKRRATYKFSTDMDTEAATKIKLDEVKERVGREIRVFETFVSSSSNAALSNEEVTDDFYEFTAEDYHRLLAAKKEDKFLKTRKIREAEEAARRSEMTKAIIRVRFPDNHTLETTFHPSETVQSLIDVLTKVVALPEQPFYIYTTPPKKIMKDMSQNFYDAGFCPGAIVYFSYDVPKGSTGPYLQEDILSLKELHAANDQGQQSEPSVQSEPEPAVATHPPVEQRKPAEKKLVKPKWLKM* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00639 250 MobiDBLite consensus disorder prediction 206 221 - -
Lapu1g00639 250 SUPERFAMILY Ubiquitin-like 83 181 IPR029071 -
Lapu1g00639 250 Pfam UBX domain 108 177 IPR001012 GO:0005515
Lapu1g00639 250 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 6 250 IPR044232 GO:0032984|GO:0051117
Lapu1g00639 250 MobiDBLite consensus disorder prediction 233 250 - -
Lapu1g00639 250 CDD UBX2_UBXN9 110 183 - -
Lapu1g00639 250 Gene3D - 99 181 - -
Lapu1g00639 250 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Lapu1g00639 250 MobiDBLite consensus disorder prediction 206 250 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00639 39 138 C2H2 Transcription Factor Family AT2G01650 34.615 2.13e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00639 K15627 - gmx:100818386 365.155