Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00631 ATGGTGTTCATATTTCCAACTCTTGTGTCCTTGAAGCTCCAAAAAATATGGCTGCTTCTTGTAATGTACTTTTGTGCATATGCAGTGGCCTCTTCTCCTAATCATGATGCTGTTGCTTCTTCTGAAGCAAATGCTTTGTTGAAGTGGAAAGCCAGCCTTGACAGCCACAGTCAAGCTTCTCTCTCTTCATGGAATGGCACTGATCCTTGCAAATGGCTGGGAATAGCATGCGATGACTCCCATTCTGTTTCTAACGTAAATCTTACACGTGTGGGATTAAAAGGTACACTTCAAACCTTTAACTTCTCATTACTTCCAAACATCCTCGTTCTGAATATGAGTTTCAACTCCTTGTCTGGAACCATTCCTCCACAAATTGAACACTTGTCCAATCTCAACACGCTTGATTTGTCTACCAATAAACTCTCTGGTAGAATTCCCAATACCATCTGTAATCTCTCCAAACTTAAATATCTGAATCTTAGTGTCAATGCTCTCTCTGGTCCAATCCCTGACGAAGTGGGCAAACTCCAGTCTCTTCTCACATTCGATATATTCACCAACAATCTCACTGAATCAATCCCACCTTCCTTAGGTACCTTGCCCCTTTTGGAATCCATTCACCTTTTTGAGAATAAACTCTCAGGACCCATTCCTCCCACTATTGGAAATTTGTCCAAGCTCACCATGTTATCTTTATCATCAAATCAACTCACCGGATCCATTCCTCCCCATATTGGAAATTTATCAAACGCCAAGGTAATATGTTTTATTGGAAACGAACTTACTGGCGAGATTCCAATAGAAATGGAGAAGCTTACTGGTTTGGAATGTTTGCAACTAGCTGATAATAATTTTATAGGCCAAATACCTCAGAACATTTGCCTCGGTGGAAACATGAAATACTTCACAGCTGGTAATAACAATTTCACAGGCCCAATTCCCCAGACTTTGAAGAAATGCTACAGCCTTAAAAGACTCAGGCTTCAGCAAAACCATCTAACTGGGGATATAACAAATTTTTTTGATGTACTTCCGAACTTGAACTACATCGATCTGAGTGAAAATAATTTTCATGGTAGTCTTTCACCTAGTTGGGGGAAGTTCCGTAGCCTCACAAGCCTCATGATTTCCAGCAATAATTTGTCAGGTTTTATCCCACCAGAACTAGGTCGGTTAACCAAATTACAGGTGCTTGATCTATCCTCAAACCATCTTATAGGAAACATTCCAGAAGATTTATGCAACTTGACCCTCTTGTTTGATCTTTCACTTAAAAACAATAATCTTTCTGGCAATGTTCCCATGAAAATAGAATCACTGCAGCAACTTAAATATTTGGAGCTTGGGTCAAATGATTTTACTGGCTTAATCCAAAAACAACTTGGTAATTTGCACAATTTATTGAGCATGAGTCTGAGCCAGAATAAATTTGAGGGGAATATTCCTCAAGAGTTTGGCAATTTGAAATATCTCTCAAGCCTCGATCTCAGTGGAAATTTGTTGAGTGGAACATTACCGCCAACGCTAAGTGGAATAAAAGGCTTAGAAACATTGAATCTATCGCACAATAGTCTTTCAGGTGGTCTCTCTACCTTGGATGATATGATAAGCTTGACATCTTTTGATCTATCATACAACCAGTTTGAGGGTCCACTTCCTCACAATCCAGTCTTCCGCAATGTTACCATTGAAGCATTGAGAAACAATAAAGCCTTGTGTGGCAATGTCACAGGCTTGGATCCTTGCGCAACAGTTAGTGGGAAATCTCATAATAATACGACAAGGAAGGTGCTAATAACAGTTTTACCCCTTACTGTGGCCATTCTAATGCTTGCAGTATTTGTTTTTGGGGTCTTCTATCATTTGTTCCGAACTTCAAAGAAAGAACAAGACCAGGTTACCAGTTTACGATCTTCCATTATATTTCCAATATGGAGTTTTGGAGGCAAAATTATGTTTGAGAACATTATTGAAGCCACCGAATATTTTGATGATAGATATCTCATTGGAGTTGGAGGTCAAGGATCTGTTTACAAAGCAATGTTACCAACAGGTGAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTTCGAATGGAGAAATGGTGAATCAGAAAGCTTTCACAAGTGAAATCCAAGCTCTGACAGAAATTCGACATCGTAACATCGTAAAGTTTTATGGGTTTTGTTCGCATTCACAATACTCATTTTTGGTGTGCGAATTCCTAGAGAGGGGCGATGTGAAGAAGATTTTGAAGGATGATGAACAGGCAACTGCTTTTGATTGGAATAAAAGGGTGGATGTTGTTAAAGACGTGGCAAAGGCTTTATGCTATATGCATCATGATTGTTTACCTCCAATTGTTCATCGCGATATATCAAGCAAAAATGTTCTTTTGGATTCAGAATATGTAGCTCATGTCTCAGACTTCGGAACAGCCAAGCTTCTTGATCAGAATTCATCCAATTGGACATCATTTGCAGGAACCTTTGGATATGCTGCCCCAGAACTTGCATACAGTATGGAGGCAAATGAGAAATGTGATGTGTATAGTTTTGGGGTGTTAGCATTGGAAATATTGTTCGGAAGGCATCCTGGTGATATTACATATTCTTTAATGCTATCATCTTCACCCATTGGTGTGACCTCAACACTTGATCATATGGTATTGATGGATAAGTTGGACGAACGTCTCCCTCATCCAACAAGCCCTGTGGTCAAAGATGTGGTATCAATTGTGAAGACAGCAATTTCCTGCTTGATTGAAAGCCCACGATCTCGCCCCACCATGGAGCAGGTTGTCAAGGAGCTTGGAACGTCAAATTCATCATTTTTACAAAATACACACCTAGAGCAAAAAGACTGA 2868 0.3964 MVFIFPTLVSLKLQKIWLLLVMYFCAYAVASSPNHDAVASSEANALLKWKASLDSHSQASLSSWNGTDPCKWLGIACDDSHSVSNVNLTRVGLKGTLQTFNFSLLPNILVLNMSFNSLSGTIPPQIEHLSNLNTLDLSTNKLSGRIPNTICNLSKLKYLNLSVNALSGPIPDEVGKLQSLLTFDIFTNNLTESIPPSLGTLPLLESIHLFENKLSGPIPPTIGNLSKLTMLSLSSNQLTGSIPPHIGNLSNAKVICFIGNELTGEIPIEMEKLTGLECLQLADNNFIGQIPQNICLGGNMKYFTAGNNNFTGPIPQTLKKCYSLKRLRLQQNHLTGDITNFFDVLPNLNYIDLSENNFHGSLSPSWGKFRSLTSLMISSNNLSGFIPPELGRLTKLQVLDLSSNHLIGNIPEDLCNLTLLFDLSLKNNNLSGNVPMKIESLQQLKYLELGSNDFTGLIQKQLGNLHNLLSMSLSQNKFEGNIPQEFGNLKYLSSLDLSGNLLSGTLPPTLSGIKGLETLNLSHNSLSGGLSTLDDMISLTSFDLSYNQFEGPLPHNPVFRNVTIEALRNNKALCGNVTGLDPCATVSGKSHNNTTRKVLITVLPLTVAILMLAVFVFGVFYHLFRTSKKEQDQVTSLRSSIIFPIWSFGGKIMFENIIEATEYFDDRYLIGVGGQGSVYKAMLPTGEVVAVKKLHSVSNGEMVNQKAFTSEIQALTEIRHRNIVKFYGFCSHSQYSFLVCEFLERGDVKKILKDDEQATAFDWNKRVDVVKDVAKALCYMHHDCLPPIVHRDISSKNVLLDSEYVAHVSDFGTAKLLDQNSSNWTSFAGTFGYAAPELAYSMEANEKCDVYSFGVLALEILFGRHPGDITYSLMLSSSPIGVTSTLDHMVLMDKLDERLPHPTSPVVKDVVSIVKTAISCLIESPRSRPTMEQVVKELGTSNSSFLQNTHLEQKD* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00631 955 PANTHER LEUCINE RICH REPEAT KINASE 2 201 942 - -
Lapu1g00631 955 FunFam MDIS1-interacting receptor like kinase 2 743 944 - -
Lapu1g00631 955 Pfam Protein kinase domain 668 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00631 955 Gene3D Phosphorylase Kinase; domain 1 625 742 - -
Lapu1g00631 955 Pfam Leucine Rich Repeat 395 417 IPR001611 GO:0005515
Lapu1g00631 955 Pfam Leucine Rich Repeat 131 153 IPR001611 GO:0005515
Lapu1g00631 955 Gene3D Ribonuclease Inhibitor 39 191 IPR032675 -
Lapu1g00631 955 ProSiteProfiles Protein kinase domain profile. 664 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00631 955 FunFam Leucine-rich repeat receptor protein kinase MSP1 626 742 - -
Lapu1g00631 955 PRINTS Leucine-rich repeat signature 393 406 - -
Lapu1g00631 955 PRINTS Leucine-rich repeat signature 132 145 - -
Lapu1g00631 955 SUPERFAMILY L domain-like 296 563 - -
Lapu1g00631 955 SMART LRR_sd22_2 441 467 - -
Lapu1g00631 955 SMART LRR_sd22_2 225 251 - -
Lapu1g00631 955 SMART LRR_sd22_2 489 518 - -
Lapu1g00631 955 SMART LRR_sd22_2 393 412 - -
Lapu1g00631 955 SMART LRR_sd22_2 129 155 - -
Lapu1g00631 955 Gene3D Ribonuclease Inhibitor 296 591 IPR032675 -
Lapu1g00631 955 Gene3D Transferase(Phosphotransferase) domain 1 743 954 - -
Lapu1g00631 955 FunFam Nuclear pore complex protein NUP107 39 194 - -
Lapu1g00631 955 Pfam Leucine rich repeat N-terminal domain 40 78 IPR013210 -
Lapu1g00631 955 Gene3D Ribonuclease Inhibitor 192 295 IPR032675 -
Lapu1g00631 955 SUPERFAMILY L domain-like 44 336 - -
Lapu1g00631 955 SMART LRR_typ_2 129 153 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 393 417 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 177 201 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 273 297 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 465 488 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 105 128 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 345 369 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 489 513 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 441 464 IPR003591 -
Lapu1g00631 955 SMART LRR_typ_2 225 249 IPR003591 -
Lapu1g00631 955 ProSitePatterns Tyrosine protein kinases specific active-site signature. 788 800 IPR008266 GO:0004672|GO:0006468
Lapu1g00631 955 SUPERFAMILY Protein kinase-like (PK-like) 641 938 IPR011009 -
Lapu1g00631 955 Pfam Leucine rich repeat 443 502 IPR001611 GO:0005515
Lapu1g00631 955 ProSiteProfiles Leucine-rich repeat profile. 395 418 IPR001611 GO:0005515
Lapu1g00631 955 FunFam Uncharacterized protein 295 592 - -
Lapu1g00631 955 FunFam MDIS1-interacting receptor like kinase 2 isoform A 195 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00631 Lapu-Chr1 18895092 18898650 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00631 13 836 Receptor kinase-like Gene Family AT4G08850 40.129 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu1g00631 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00631 - - gmx:100809509 1472.99