Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00630 ATGGCGTTTGTCTTTCCAACGCTTCTGTCCATGAATCTCCAACCTTTATGGCTGCTTCTTATAATGTTCTTTTGTGCATTTCCCCATTTTCATGCTGCCGATTCTTCTGATATTGATTCAGAAGCAAATGCTTTGCTGAAATGGAAAGCCAGCCTTGACAGCCGCAGTCAAGCTTCTCTCTCTTCATGGAATGGCACTGATCCTTGCAAATGGCAGGGAATTGCATGTGATGAGTCCAATTCTGTTTCTAACATAAATCTTACACGTGTGGGATTAAAAGGTACACTTCAAACTTTTAACTTCTCATTACTTCCAAACATCCTCGTTCTGAATATGAGTTTCAACTCCTTGTCTGGAACCATTCCTCCACAAATTGAACACTTGTCCAATCTCAACACGCTTGATTTGTCTACCAATAAACTCTCTGGTAGAATTCCCAATACCATCTGTAATCTCTCCAAACTTAAATATCTGAATCTTAGTGTCAATGCTCTCTCTGGTCCAATCCCTGACGAAGTGGGCAAACTCCAGTCTCTTCTCACATTCGATATATTTACCAACAATCTCACTGAATCAATCCCACCTTCCTTAGGTACCTTGCCCCTTTTGGAATCCATTCACCTTTTTGAGAATAAACTCTCAGGACCCATTCCTCCCACTATTGGAAATTTGTCCAAGCTCACCATGTTATCTTTATCATCAAATCAACTCACCGGAACCATTCCTCCCCATATTGGAAATTTATCAAACGCCAAGGTAATATGTTTTATTGGAAACGAACTTACTGGCGAGATTCCAATAGAAATGGAGAAGCTTACTGGTTTGGAATGTTTGCAACTAGCTGATAATAATTTTATAGGCCAAATACCTCAGAACATTTGCCTCGGTGGAAACATGAAATACTTTACAGCTGGTAATAACAATTTCACAGGCCCAATTCCCCAGACTTTGAAGAAATGCTACAGCCTTAAGAGACTCAGGCTTCAGCAAAACCTTCTAACTGGGGATATAACAAACTTTTTTGATGTACTTCCAAACTTGAATTACATCGATCTGAGTGAAAATAATTTTCATGGTAGTCTTTCTCCTAGTTGGGGGAAATTCCGTAGCCTCGCAAGCCTCATGATTTCCAGCAATAATTTGTCAGGTGTTATTCCACCAGAACTAGGAGGGGCAACCAAATTACAGGTGCTTCATCTATCCTCAAACCATCTCATAGGAAACATTCCAGAAGATTTATTCAACTTGACCCTCTTGTTTGATCTTTCACTTAGCAACAATAATCTTTCTGGTAATGTTCCCATGAAAATAGAATCACTGCAGCAACTTAAATATTTGGAGCTTGGGTCAAATGATTTTACTGGCTTAATCCAAAAACAACTTGGTAATTTGCACAATTTATTGAGCATGAGTCTGAGCCAGAATAAATTTGAGGGGAATATTCCTCAAGAGTTTGGCAATTTGAAATATCTCTCAAGCCTCGATCTCAGTGAAAATTTGTTGAGTGGAACATTACCGCCAACGCTAAGTGGAATAAAAGGCTTAGAAACATTGAATCTATCGCACAATAGTCTTTCAGGTGGTCTCTCTACCTTGGATGATATGATAAGCTTGACATCTTTTGATCTATCATACAACCAGTTTGAGGGTCCACTGCCTGACAATCCAGTCTTCCGCGATGTTACCATTGAAGCATTGAGAAATAATAAAGGCTTGTGCGGCAATGTCACTGGCTTGGAGCCTTGCCCAACAGTAAGTGGGAAATCTCATAGTAATACGACAAGGAAGGTGCTAATAACAGTTTTACCCCTTACTGTGGCCATTCTCATGCTTGCAGTACTTGTTTTTGGGGTCTTCTATCATTTATGCCGAACTTCAAAGAAAGAACAAGACCAGGTCACAAGTTTACGATCTGCCAGCATGTTTCCAATATGGAGTTTTGGAGGCAAAATTATGTTTGAGAACATTATTGAAGCCACCGAATATTTTGATGATAGATATCTCATTGGAGTTGGAGGTCAAGGATCTGTTTACAAAGCAATGTTACCAACAGGTGAAGTTGTTGCTGTGAAGAAACTCCATTCAGTTTCGAATGGAGAAATGGTGAATCAGAAAGCTTTCACAAGTGAAATCCAAGCTCTGACAGAAATTCGACATCGTAACATCGTAAAGTTTTATGGGTTTTGTTCGCATTCACAGTACTCATTTTTGGTGTGCGAATTCCTAGAGAGGGGCGATGTGAAGAAGATTTTGAAGGATGATGAACAGGCAACTGCTTTTGATTGGAATAAAAGGGTGGATGTTGTTAAAGACGTGGCAAATGCTTTATGCTATATGCATCATGATTGCTTACCTCCAATTGTTCATCGTGATATATCAAGCAAAAATGTTCTTTTGGATTCAGAATATGTAGCTCATGTCTCAGACTTCGGAACAGCCAAGCTTCTTGATCAGAATTCATCCAATTGGACATCATTTGCAGGAACCTTTGGATATGCTGCCCCAGAACTTGCATACACAATGGAAGTAACCGAGAAATGTGACGTGTATAGCTTTGGGGTGTTAGCATTGGAAATATTATTTGGAAGGCACCCTGGTGATGTTACATCTTCCTTGTCAATTGGTATGAGCTCAACACTTGATCATATGGTGTTGATGGATAAGTTGGATGAACGTCTTCCTGATCCAACAAGTTCTACTGTGAAAGAGGTGGTATCAGTTGTGAAGATAGCAATTGCTTGCTTGACTGAAAGTCCACGATCTCGCCCAACCATGAAGGATGTTACCAAGGAGCTTGCAATGTCGAGGTCATCTTCACTGTCACACACAGAGGCCCAAAGACTG 2844 0.4012 MAFVFPTLLSMNLQPLWLLLIMFFCAFPHFHAADSSDIDSEANALLKWKASLDSRSQASLSSWNGTDPCKWQGIACDESNSVSNINLTRVGLKGTLQTFNFSLLPNILVLNMSFNSLSGTIPPQIEHLSNLNTLDLSTNKLSGRIPNTICNLSKLKYLNLSVNALSGPIPDEVGKLQSLLTFDIFTNNLTESIPPSLGTLPLLESIHLFENKLSGPIPPTIGNLSKLTMLSLSSNQLTGTIPPHIGNLSNAKVICFIGNELTGEIPIEMEKLTGLECLQLADNNFIGQIPQNICLGGNMKYFTAGNNNFTGPIPQTLKKCYSLKRLRLQQNLLTGDITNFFDVLPNLNYIDLSENNFHGSLSPSWGKFRSLASLMISSNNLSGVIPPELGGATKLQVLHLSSNHLIGNIPEDLFNLTLLFDLSLSNNNLSGNVPMKIESLQQLKYLELGSNDFTGLIQKQLGNLHNLLSMSLSQNKFEGNIPQEFGNLKYLSSLDLSENLLSGTLPPTLSGIKGLETLNLSHNSLSGGLSTLDDMISLTSFDLSYNQFEGPLPDNPVFRDVTIEALRNNKGLCGNVTGLEPCPTVSGKSHSNTTRKVLITVLPLTVAILMLAVLVFGVFYHLCRTSKKEQDQVTSLRSASMFPIWSFGGKIMFENIIEATEYFDDRYLIGVGGQGSVYKAMLPTGEVVAVKKLHSVSNGEMVNQKAFTSEIQALTEIRHRNIVKFYGFCSHSQYSFLVCEFLERGDVKKILKDDEQATAFDWNKRVDVVKDVANALCYMHHDCLPPIVHRDISSKNVLLDSEYVAHVSDFGTAKLLDQNSSNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEILFGRHPGDVTSSLSIGMSSTLDHMVLMDKLDERLPDPTSSTVKEVVSVVKIAIACLTESPRSRPTMKDVTKELAMSRSSSLSHTEAQRL 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00630 948 SMART LRR_typ_2 368 392 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 488 512 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 393 416 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 128 152 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 272 296 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 176 200 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 104 127 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 224 248 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 464 487 IPR003591 -
Lapu1g00630 948 SMART LRR_typ_2 440 463 IPR003591 -
Lapu1g00630 948 PANTHER LEUCINE RICH REPEAT KINASE 2 202 938 - -
Lapu1g00630 948 SUPERFAMILY Protein kinase-like (PK-like) 641 932 IPR011009 -
Lapu1g00630 948 FunFam Nuclear pore complex protein NUP107 38 193 - -
Lapu1g00630 948 FunFam Leucine-rich repeat receptor protein kinase MSP1 625 741 - -
Lapu1g00630 948 Gene3D Ribonuclease Inhibitor 191 293 IPR032675 -
Lapu1g00630 948 Gene3D Ribonuclease Inhibitor 39 190 IPR032675 -
Lapu1g00630 948 FunFam MDIS1-interacting receptor like kinase 2 742 938 - -
Lapu1g00630 948 Pfam Protein kinase domain 667 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00630 948 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Lapu1g00630 948 MobiDBLite consensus disorder prediction 931 948 - -
Lapu1g00630 948 SUPERFAMILY L domain-like 319 574 - -
Lapu1g00630 948 PRINTS Leucine-rich repeat signature 491 504 - -
Lapu1g00630 948 PRINTS Leucine-rich repeat signature 512 525 - -
Lapu1g00630 948 SMART LRR_sd22_2 440 466 - -
Lapu1g00630 948 SMART LRR_sd22_2 128 154 - -
Lapu1g00630 948 SMART LRR_sd22_2 488 517 - -
Lapu1g00630 948 SMART LRR_sd22_2 392 411 - -
Lapu1g00630 948 SMART LRR_sd22_2 224 250 - -
Lapu1g00630 948 FunFam Uncharacterized protein 294 591 - -
Lapu1g00630 948 Gene3D Transferase(Phosphotransferase) domain 1 742 947 - -
Lapu1g00630 948 Pfam Leucine rich repeat 442 501 IPR001611 GO:0005515
Lapu1g00630 948 ProSiteProfiles Protein kinase domain profile. 663 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00630 948 FunFam MDIS1-interacting receptor like kinase 2 isoform A 194 293 - -
Lapu1g00630 948 SUPERFAMILY L domain-like 44 337 - -
Lapu1g00630 948 Gene3D Phosphorylase Kinase; domain 1 623 741 - -
Lapu1g00630 948 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515
Lapu1g00630 948 MobiDBLite consensus disorder prediction 921 948 - -
Lapu1g00630 948 Gene3D Ribonuclease Inhibitor 294 590 IPR032675 -
Lapu1g00630 948 ProSitePatterns Tyrosine protein kinases specific active-site signature. 787 799 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00630 Lapu-Chr1 18880501 18883497 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00630 12 835 Receptor kinase-like Gene Family AT4G08850 40.899 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu1g00630 Pkinase 1.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00630 - - gmx:100809509 1450.65