Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00629 ATGCAAGCATTTCTCCTGCACTTGATGCAATCAGTGGCTGAACAATTCACTATGGTGATCATATTTTCAACTCTTCTGTCCATTAAGTTCCAACCCTTTTGGCTGCTTCTTCTGATATACTTTTGTGCATTTCCCCATTGTGATGCTGCTAATTCTTCTCATATTGCTTCTGAAGCAAATGCTTTGTTGAAGTGGAAAGCTAGCCTTGACAACCACAGTCAAGCTTCTCTCTCTTCATGGACTGGAAATAGTTCTTGTAATTGGCTTGGAATTGCATGTGGTGAGTCCAATCACGTGTTCAAAATAAATCTTACGAATATTGGATTAAGAGGTACGCTTCAAAATCTCAACTTCTCCATGTTTACAAAGATTCGCACTCTGATTATAAGTAACAACTCCTTGAATGGAAGTATTCCTCCTCAAATTGGAGCACTTTCGAATCTTGAAACTCTTGATTTGTCCATTAATAAGCTCTATGGTAGCATTCCCAGTACCATTGCTAATCTGTCCAAACTTTCATATCTCAGTCTTCATGCAAATGATCTCTCTGGGATCATTCCTTCTGAAATCACTCAGTTGATTGGCCTTCACACATTGTTCATGGGTGACAATATTTTTAGTGGGTCCCTTCCTCAAGAAATAGGTAGACTGAGGAATCTGAGAATACTTGATATTCCTTGGTCCAATCTCACAGGGACAATCCCAATCTCTATAGGAAAGTTAAATAATTTGTCTCATCTAGATGTAGGAGGCAACAACCTCTCTGGCACCATTCCCCAGAGAATTTGGAATATGGACTTAAAGCATTTGTCCCTTGCAGTTAATAACTTCAACGGTTCCATCCCCAAAGAAATTGTGAATTTGAGGAACCTGGAGATTCTATATCTTCAGAAAAGTGGCCTTTCTGGCGCCATGCCAGAAGAAATTGGGATGTTAGGGAAGATAATAGAACTGGACATCAGCAATTGTAATCTTGTTGGGTCCATTCCTATTTCAATTGGAGCTTTGACCAATATAACACTTCTAAAGTTACAAGACAATCAACTTTTTGGTCACATTCCTGTTGAAGTTGGGAAGTTGATTAACCTCAACATTCTATTTCTTGGAAATAATAATCTTTCTGGCTCAATTCCTCAAGAAATTGGACTCTTGAAAAAACTCGCTCAACTTGATTTGTCTATGAACTCTCTCTCTGGGAAAATCCCCTCCACAATTGGAAACTTAAGCAATTTAAATGATCTTTACCTTTATGCAAACAGATTCTCTGGTTTTATCCCTGACGAAGTGGGAAATCTCCGTTCTCTTGTCAATCTCCAATTGTTGAGCAACAACCTCTCTGGACCAATCCCACCTTCCATAGGTAACTTGGCCAATTTGGATACCATTTATCTTGATGAAAATAAACTCTCTGGATCCATTCCTTCAACTATTACAAATTTGTCAAAGCTAAGTGAATTAATTTTATCATCAAATGAGCTCACTGGACAAATCCCGGCTCACATCGGAAACATGGTCAACTTGGACTCCATTTTCCTTGGAAAAAACAAACTCTCTGGATCTATCCCTTCCACTATCGGAAATTTGTCGAAGCTTACTGAATTATCTTTATCCTCAAATAAGCTCACTGGACCGATCCCAACTCCTATTGGTAACATGGTTAATTTGGACTCAATTAACCTTTATCAAAATAAACTCTCTGGATCTATTCCTTCAACTATTGGAAATTTAACCAAAGTAAGGACGTTATCTATATTTGAAAATGATCTTACTGGCAAGATTCCAATTGAAATGAACAAGCTTATTGCTTTGGAAAATTTGCACCTAGCTTATAATAATTTTGTTGGCCATTTACCTCACAATGTTTGCATTGGTGGAATGTTGACAACTTTTTCTGCTAGTGATAACAATTTCACAGGCCATATTCCGGAGAGTTTGAAGAATTGCTCCAGCCTTGTAAGAGTCAGGCTTCAACAAAATCAATTAACTGGAAATATAACGGATGCTTTTGGCGTGGTTTCAAACTTGGACTACATCGAATTGAGTGACAATAACTTTTATGGTCACCTTTCCTCTAACTGGGGAAAGTTCCGTAGCCTAACAAGCCTCAAGATCTCCAACAATAATTTATCAGGTGTTATACCACCACAACTAGGTGTGGCAATCCAATTGCGTGTACTTCACTTATCCTCAAATCGTCTTACAGGAAACATCCCACAAGATTTATGTAACTTGGCCTTCTTGTATGATCTCCAACTCAACAACAATAATCTTACAGGAAATGTTCCTGTAAAAATATTATCAATGCAGAACCTTCAAATTTTGATGCTTGGATCAAATAATTTGTCTGGCTTAATCCCAAAAAATGTTGGGAATTTGCTCAATTTATTGAACATGAGTCTGAGCCGGAATAAATTTGAGGGAAACATTCCTTTAGAGCTTGGCAAATTGAAATTTCTCTCAAGTCTCGATCTCAGTGGAAATTTGTTGAGTGGAACATTACCACCAACGCTTGGAGAATTGAAAAGATTAGAAATATTGAATCTCTCTCAAAATAATCTTTCAGGTGATCTCTCTAGCTTTGATGATATGATGAGTTTGACTTCTATTGATATATCATACAACCAGTTTGAGGGTCCAGTTCCAAACATTCCAGCCTTCCACGATGCTAGAATTGAAGCATTGAGAAATAATAAAGGCTTGTGTGGAAATGCCACTAGCTTGGAACCTTGCCCAACGTTAAGTGGGAAATCTCACAGTCTTACGAGAAAAAAAGTCATAATAGTTTTATCCCTTACATTGGGTGCTCTAATACTGGCATTATTTACTTTCGGAGCCTTTTATCATTTATGCAAAACTTCAATAAAGAAGGAAGGCCAGGTTACAAGTTTACAAACTACAGACATATTTTCAATATGGAGTTTTGATGGAAAATTGATATTTGAGAATATTATTGAAGCCACAGATCACTTTGATAACAAGCATCTCATTGGCGTTGGAGGGCAAGGTTGTGTTTACAAAGCAATGCTGCCTACAAATCAAGTTGTTGCCGTGAAGAAACTCCATTCCATTCCAAATGGAGAAATGCTCAATTTGAAAGCTTTCACAAGTGAGATCCAAACTTTAACACAAATTCGACATCGTAACATTGTAAAGTTATATGGGTTTTGTTCACATTCACAATTCTCATTTTTGGTGTGTGAATTTATCGAGAAGGGCGATGTAGGAAAGATTTTGAAGAATGATGAACATGCAGTTGCCTTTGACTGGAATAAAAGAGTTCATGCTGTTAAAGGGGTAGCAAATGCTTTATGCTATATGCATCATGATTGTTCACCTCCAATTGTTCATCGTGATATATCAAGCAAGAATGTTCTTTTGGATGCACAATATGTAGCTCATCTCTCAGACTTCGGAACAGCCAAATTTCTTTATACAAAATCATCCAATTCTACATCATTTGTAGGAACTTTTGGATATGCTGCTCCAGAACTTGCATACAGTATGGAGGCAAATGAGAAATGTGATGTGTATAGTTTTGGGGTGTTAGCATTGGAAATATTGTTCGGAAGGCATCCTGGTGATATTACATATTCTTTAATGCTATCATCATCTTCACCCATTGGTGTGACCACAACACTTGATCATATGGCATTGTTGGATAAGTTGGACGAACGTCTCCCTCATCCAACAAGTCCTATCATTATGGAGGTGCTAGCAATTGTTAAGATAGCAATCTCCTGTTTGAATGAAAGCCCACGATCTCGCCCTACCATGGGACAGGTTACCAAGGAGCTTGCAATGTGGAATTCATCTCGAAGGTCTCCCCACGCACACAGATGA 3840 0.3792 MQAFLLHLMQSVAEQFTMVIIFSTLLSIKFQPFWLLLLIYFCAFPHCDAANSSHIASEANALLKWKASLDNHSQASLSSWTGNSSCNWLGIACGESNHVFKINLTNIGLRGTLQNLNFSMFTKIRTLIISNNSLNGSIPPQIGALSNLETLDLSINKLYGSIPSTIANLSKLSYLSLHANDLSGIIPSEITQLIGLHTLFMGDNIFSGSLPQEIGRLRNLRILDIPWSNLTGTIPISIGKLNNLSHLDVGGNNLSGTIPQRIWNMDLKHLSLAVNNFNGSIPKEIVNLRNLEILYLQKSGLSGAMPEEIGMLGKIIELDISNCNLVGSIPISIGALTNITLLKLQDNQLFGHIPVEVGKLINLNILFLGNNNLSGSIPQEIGLLKKLAQLDLSMNSLSGKIPSTIGNLSNLNDLYLYANRFSGFIPDEVGNLRSLVNLQLLSNNLSGPIPPSIGNLANLDTIYLDENKLSGSIPSTITNLSKLSELILSSNELTGQIPAHIGNMVNLDSIFLGKNKLSGSIPSTIGNLSKLTELSLSSNKLTGPIPTPIGNMVNLDSINLYQNKLSGSIPSTIGNLTKVRTLSIFENDLTGKIPIEMNKLIALENLHLAYNNFVGHLPHNVCIGGMLTTFSASDNNFTGHIPESLKNCSSLVRVRLQQNQLTGNITDAFGVVSNLDYIELSDNNFYGHLSSNWGKFRSLTSLKISNNNLSGVIPPQLGVAIQLRVLHLSSNRLTGNIPQDLCNLAFLYDLQLNNNNLTGNVPVKILSMQNLQILMLGSNNLSGLIPKNVGNLLNLLNMSLSRNKFEGNIPLELGKLKFLSSLDLSGNLLSGTLPPTLGELKRLEILNLSQNNLSGDLSSFDDMMSLTSIDISYNQFEGPVPNIPAFHDARIEALRNNKGLCGNATSLEPCPTLSGKSHSLTRKKVIIVLSLTLGALILALFTFGAFYHLCKTSIKKEGQVTSLQTTDIFSIWSFDGKLIFENIIEATDHFDNKHLIGVGGQGCVYKAMLPTNQVVAVKKLHSIPNGEMLNLKAFTSEIQTLTQIRHRNIVKLYGFCSHSQFSFLVCEFIEKGDVGKILKNDEHAVAFDWNKRVHAVKGVANALCYMHHDCSPPIVHRDISSKNVLLDAQYVAHLSDFGTAKFLYTKSSNSTSFVGTFGYAAPELAYSMEANEKCDVYSFGVLALEILFGRHPGDITYSLMLSSSSPIGVTTTLDHMALLDKLDERLPHPTSPIIMEVLAIVKIAISCLNESPRSRPTMGQVTKELAMWNSSRRSPHAHR* 1280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00629 1279 Pfam Leucine rich repeat N-terminal domain 57 93 IPR013210 -
Lapu1g00629 1279 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 398 622 - -
Lapu1g00629 1279 Gene3D Ribonuclease Inhibitor 311 429 IPR032675 -
Lapu1g00629 1279 Gene3D Ribonuclease Inhibitor 206 310 IPR032675 -
Lapu1g00629 1279 SUPERFAMILY L domain-like 626 887 - -
Lapu1g00629 1279 SMART LRR_sd22_2 241 267 - -
Lapu1g00629 1279 SMART LRR_sd22_2 456 482 - -
Lapu1g00629 1279 SMART LRR_sd22_2 384 410 - -
Lapu1g00629 1279 SMART LRR_sd22_2 504 530 - -
Lapu1g00629 1279 SMART LRR_sd22_2 768 789 - -
Lapu1g00629 1279 SMART LRR_sd22_2 145 171 - -
Lapu1g00629 1279 SMART LRR_sd22_2 552 578 - -
Lapu1g00629 1279 Gene3D Phosphorylase Kinase; domain 1 951 1068 - -
Lapu1g00629 1279 SUPERFAMILY RNI-like 330 669 - -
Lapu1g00629 1279 Gene3D Transferase(Phosphotransferase) domain 1 1069 1277 - -
Lapu1g00629 1279 FunFam Nuclear pore complex protein NUP107 55 211 - -
Lapu1g00629 1279 Gene3D Ribonuclease Inhibitor 503 579 IPR032675 -
Lapu1g00629 1279 SMART LRR_typ_2 408 432 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 528 552 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 360 384 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 169 193 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 816 840 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 456 479 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 721 744 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 480 504 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 768 792 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 600 624 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 696 720 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 241 265 IPR003591 -
Lapu1g00629 1279 SMART LRR_typ_2 145 168 IPR003591 -
Lapu1g00629 1279 SUPERFAMILY RNI-like 101 422 - -
Lapu1g00629 1279 FunFam Leucine-rich receptor-like protein kinase family protein 307 397 - -
Lapu1g00629 1279 Pfam Leucine rich repeat 819 876 IPR001611 GO:0005515
Lapu1g00629 1279 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Lapu1g00629 1279 Pfam Leucine rich repeat 482 541 IPR001611 GO:0005515
Lapu1g00629 1279 Gene3D Ribonuclease Inhibitor 598 912 IPR032675 -
Lapu1g00629 1279 Gene3D Ribonuclease Inhibitor 431 502 IPR032675 -
Lapu1g00629 1279 PRINTS Leucine-rich repeat signature 819 832 - -
Lapu1g00629 1279 PRINTS Leucine-rich repeat signature 840 853 - -
Lapu1g00629 1279 FunFam MDIS1-interacting receptor like kinase 2 1069 1271 - -
Lapu1g00629 1279 ProSiteProfiles Protein kinase domain profile. 990 1267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00629 1279 Pfam Protein kinase domain 991 1263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu1g00629 1279 FunFam Leucine-rich repeat receptor protein kinase MSP1 953 1068 - -
Lapu1g00629 1279 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1114 1126 IPR008266 GO:0004672|GO:0006468
Lapu1g00629 1279 Gene3D Ribonuclease Inhibitor 54 205 IPR032675 -
Lapu1g00629 1279 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 512 1266 - -
Lapu1g00629 1279 FunFam Uncharacterized protein 623 919 - -
Lapu1g00629 1279 SUPERFAMILY Protein kinase-like (PK-like) 971 1267 IPR011009 -
Lapu1g00629 1279 FunFam Leucine-rich repeat receptor protein kinase EMS1 212 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00629 Lapu-Chr1 18849475 18853397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00629 241 810 Receptor kinase-like Gene Family AT4G08850 34.615 1.67e-87 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lapu1g00629 Pkinase 4.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00629 - - gmx:106794215 1631.31