Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00621 GCCCTCCCAAGAGTGAGAAACCGAAACTCCAACAAAGAGAGAGCGTTAGAGCGTTGGTGTGTGCGCATTCATTCAGTGATGTGCAACAAGAACAGTCCTTCTTCTGCAGACATTCAAACAACCTCTACAATGAAGAGGACACGGAAACCCACGAAACGATATCACTCTTCTTCCTCCTCCTCCTCCTCTTCTTCCTCGCTTAAGCCGCACCGGCGCGGCAACCGGACCAAGACGCGGAGGCCCAAGTTCGTCAGTCTGCGTCTCCAGCTATCCGAGCCCAAGAACATGGCGGCCCAGCCCAAGCCCAAGACCCAACAACAGCCGCAGCTGAACCTCTTCCCTCTGCATCCGGAGCACCATGACATGCACGAGGAGCAGAACGTGGCGCTGCTCTTCAGCACGGAGGGCGGGGCGACGCTGACGGGGCTGCTGGAAGAGGATTCGATGTCGCCGTCGTCGGCAACTACGGAGGGGTCGCTGTCGGCGATGACGTGTCCGGCGGAGGACGCGGGGAATTGGCTAGTGAGGAAGGCGATGCGGCGGAGGGAGAGCGAGGAGGGGAGCGAGGAGAGGTGGGTGTGCTACTCGGAGGTGGTGGAGGAGAAGAAGGAGGTGATGGAGGAGGTGACGAGTTATTGCATGATGGGGACAACGACGACGGCGACTTCCTTTGGGTTGTTGTCTTTGAAGCTGGATCACCAGGGAATATTGAATGCTTGGTCTGATAAAGGCTCGCTATACGTCGCGGGAGAGGGGGCCCCACACACTGTCCCAGACTTCCTCAATGGTTTCCTCCTTCATAATGCCTTCCTCCCCCATGTTGCATGGAATGGTTGGGGGAGTGGTGTGGTTGGCAACGCATGGAATGTTCCTGAAGATTGCGGGGCTGACAAGACGAATGTGAAGGAAGAAAATGGTTGGAAGTTGGGGCAGAGAGAGGCAAGCGTACAGAGATACAAGGAGAAGAGGCAAAGCAGGCTCTTCTCTAAGAAGATCCGTTATGAAGTTCGCAAGCTGAATGCTGAGAAACGGCCCAGGATGAAGGGACGATTTGTGAAGAGGGAATGA 1068 0.5609 ALPRVRNRNSNKERALERWCVRIHSVMCNKNSPSSADIQTTSTMKRTRKPTKRYHSSSSSSSSSSSLKPHRRGNRTKTRRPKFVSLRLQLSEPKNMAAQPKPKTQQQPQLNLFPLHPEHHDMHEEQNVALLFSTEGGATLTGLLEEDSMSPSSATTEGSLSAMTCPAEDAGNWLVRKAMRRRESEEGSEERWVCYSEVVEEKKEVMEEVTSYCMMGTTTTATSFGLLSLKLDHQGILNAWSDKGSLYVAGEGAPHTVPDFLNGFLLHNAFLPHVAWNGWGSGVVGNAWNVPEDCGADKTNVKEENGWKLGQREASVQRYKEKRQSRLFSKKIRYEVRKLNAEKRPRMKGRFVKRE* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00621 355 MobiDBLite consensus disorder prediction 30 45 - -
Lapu1g00621 355 MobiDBLite consensus disorder prediction 54 69 - -
Lapu1g00621 355 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 42 355 - -
Lapu1g00621 355 Pfam CCT motif 312 354 IPR010402 GO:0005515
Lapu1g00621 355 MobiDBLite consensus disorder prediction 30 84 - -
Lapu1g00621 355 ProSiteProfiles CCT domain profile. 312 354 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00621 Lapu-Chr1 18721900 18727487 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00621 227 354 C2C2-CO-like Transcription Factor Family AT1G73870 45.312 2.60e-22 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu1g00621 CCT 1.2e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00621 - - gmx:100798231 490.73