Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu1g00598 ATGTTTATCAGCGAGTTCATCACAACTCTTGAAGGAGACCAAGGTATTTGCTACACTCATCCAGAAAATCTTCAAGGTGCTAAGAAAGATGGGAGTTATGTCCATTTCTTTCACAGGACAATCAATGCTTATGCCACTGGTCAAAGAAAGCGTCGTAGGATTCATCATCAACAGGGTTTGACTGAAGAACAATGGCGTTGGCACAAGACTGGTAGGACGAAAGCTATAACAGAAGATGGAGTGCACAAAGGCTTTAAGAAAATCATGGTTCTTCATGTAAGTTCTAAGAGTGGGTCCAAACCCCACAAATCCAACTGGGTAATGCATCAGTATCATCTAGGGACTGACGAAGATGAAAAGGAAGGTGAATATGTGGTTTCTAAAATTTTTTATCAACAGCAAAAGCAGACTGAGAAAAATGATCCAATGGTTGAAGATCATAACAATATAGTGTCAAGAACAAGTCCAAGGACTCCAAAACCATATCCCCCTAATCCACCTCGAGTGGGAAACTCTGTTGATTGTGATGATTACATTGATGAAACTGTAACTCTGTCTTCTGCCCCGGATACCAAGACAATCTTTGGAGAATCACATGCCCCAATATCTGGTATTCAGGATCTAGACAATTCTGCTTGGTTAGCTGGCGAATCACAAGCTGACGAACACACTAAATATGATGGCTTGGACGACATATTATTGTGCAAGGAAATCTTAGATTCTTCTACTGTGTTAAATGATTCTGGATTGGACTCCAGCAATCTCTATGACTTAGCATTCTATGATAACCAAATTTCTAGAAATGATAACGAATCTTGCGGAATTTCTGTCCTGGATACGCTGGAACTGGACACTCCTCCGGATTTTGATCTTTCTAATTTGAACTTTTGTTCTCAAGACAGTATCCTTGAGTGGATGGACAGGCTATGA 930 0.4032 MFISEFITTLEGDQGICYTHPENLQGAKKDGSYVHFFHRTINAYATGQRKRRRIHHQQGLTEEQWRWHKTGRTKAITEDGVHKGFKKIMVLHVSSKSGSKPHKSNWVMHQYHLGTDEDEKEGEYVVSKIFYQQQKQTEKNDPMVEDHNNIVSRTSPRTPKPYPPNPPRVGNSVDCDDYIDETVTLSSAPDTKTIFGESHAPISGIQDLDNSAWLAGESQADEHTKYDGLDDILLCKEILDSSTVLNDSGLDSSNLYDLAFYDNQISRNDNESCGISVLDTLELDTPPDFDLSNLNFCSQDSILEWMDRL* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu1g00598 309 ProSiteProfiles NAC domain profile. 1 132 IPR003441 GO:0003677|GO:0006355
Lapu1g00598 309 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 218 IPR044799 GO:0003700
Lapu1g00598 309 Gene3D NAC domain 2 138 IPR036093 GO:0003677|GO:0006355
Lapu1g00598 309 FunFam NAC domain-containing protein 8 1 136 - -
Lapu1g00598 309 MobiDBLite consensus disorder prediction 136 170 - -
Lapu1g00598 309 Pfam No apical meristem (NAM) protein 6 113 IPR003441 GO:0003677|GO:0006355
Lapu1g00598 309 SUPERFAMILY NAC domain 13 132 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu1g00598 Lapu-Chr1 18316953 18319271 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu1g00598 2 136 NAC Transcription Factor Family AT4G28500 56.296 5.98e-49 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu1g00598 NAM 2.6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu1g00598 - - gmx:100780442 489.189